Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 AC010205.1-201ENST00000616668 449 ntBASIC0.86□□□□□ -2.27
KLHDC3Q9BQ90 RNU6-1175P-201ENST00000365200 107 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 RNU6-708P-201ENST00000384217 107 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 AL390729.2-201ENST00000416137 156 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 PIGPP3-201ENST00000425307 415 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 AC236972.2-201ENST00000434979 310 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 AC005042.3-201ENST00000453230 174 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 AC114811.1-201ENST00000507207 168 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 SNORD79.1-201ENST00000516069 84 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 RNU6-875P-201ENST00000516488 106 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 MIR4698-201ENST00000577795 80 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 MIR4423-201ENST00000580922 80 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 MIR4661-201ENST00000582720 75 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 MIR8070-201ENST00000616510 88 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 AC091925.1-201ENST00000623204 462 ntBASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
KLHDC3Q9BQ90 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 Y_RNA.39-201ENST00000362620 98 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 Y_RNA.172-201ENST00000363765 102 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 Y_RNA.253-201ENST00000364562 112 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 Y_RNA.263-201ENST00000364659 114 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 Y_RNA.303-201ENST00000364998 94 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 RNU1-115P-201ENST00000365329 160 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 Y_RNA.462-201ENST00000384268 102 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 SNORA72-201ENST00000384339 132 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 SNORA80D-201ENST00000384488 135 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 RNU6-1009P-201ENST00000390996 107 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 MCFD2P1-201ENST00000417812 300 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 RPS20P10-201ENST00000451209 253 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 RNU6-966P-201ENST00000516479 104 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 AL008636.1-201ENST00000625038 1018 ntBASIC0.84□□□□□ -2.27
KLHDC3Q9BQ90 Y_RNA.252-201ENST00000364556 101 ntBASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 RNU1-93P-201ENST00000364704 169 ntBASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.329-201ENST00000365209 107 ntBASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 MIR1276-201ENST00000408707 83 ntBASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 SNORA25.10-201ENST00000515926 124 ntBASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 AC103810.9-201ENST00000606688 112 ntBASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.772-201ENST00000606692 102 ntBASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.363-201ENST00000365529 113 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.496-201ENST00000384444 101 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 MIR15B-201ENST00000385045 98 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 MIR522-201ENST00000385071 87 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 RNU6-855P-201ENST00000410395 104 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 MTND5P20-201ENST00000448677 143 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 AC245047.8-201ENST00000456455 284 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 RNU6-976P-201ENST00000516086 111 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 SNORA40.14-201ENST00000516543 86 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 MIR4801-201ENST00000582704 82 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 AC092447.9-201ENST00000603395 144 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 AL121655.1-201ENST00000605811 308 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 AL096861.1-201ENST00000610899 123 ntBASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
KLHDC3Q9BQ90 AC117470.1-201ENST00000381974 330 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.529-201ENST00000384586 119 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 MIR1298-201ENST00000408783 112 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 AF228730.4-201ENST00000421457 183 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 AC002429.1-201ENST00000437672 148 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 HMGN2P32-201ENST00000444648 269 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.676-201ENST00000516393 96 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 RNU7-116P-201ENST00000516940 62 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.713-201ENST00000517013 96 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.714-201ENST00000517065 90 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 MIR5188-201ENST00000583467 113 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 RPS29P30-201ENST00000600975 111 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 AL391903.3-201ENST00000612158 163 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 AL606534.2-204ENST00000635008 178 ntBASIC0.81□□□□□ -2.28
KLHDC3Q9BQ90 snoU2-30.1-201ENST00000365012 70 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.331-201ENST00000365267 102 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.368-201ENST00000365547 113 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 RNU6-1323P-201ENST00000384025 107 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.456-201ENST00000384232 111 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.526-201ENST00000384572 110 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 MIR136-201ENST00000385207 82 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 RNU6-131P-201ENST00000391144 107 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 AC024067.1-201ENST00000426199 223 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 AL160004.2-201ENST00000432935 350 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.661-201ENST00000516003 99 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 RNU4-77P-201ENST00000516692 156 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 Y_RNA.702-201ENST00000516843 96 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 DEFB108E-201ENST00000524692 240 ntBASIC0.8□□□□□ -2.28
KLHDC3Q9BQ90 MIR548S-201ENST00000581352 82 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms