Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 RNU2-7P-201ENST00000410794 178 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 RNU6-651P-201ENST00000411040 105 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.62□□□□□ -2.15
PKP2Q99959 AL445685.2-201ENST00000422551 342 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 AC024067.1-201ENST00000426199 223 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 AC108059.2-201ENST00000434626 151 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 AC107393.1-201ENST00000512403 346 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 TRMT112P2-201ENST00000512910 132 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 SNORA70.12-201ENST00000516084 153 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 RNU6-794P-201ENST00000517261 64 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 AC027419.1-201ENST00000522976 328 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.62□□□□□ -2.15
PKP2Q99959 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.62□□□□□ -2.15
PKP2Q99959 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
PKP2Q99959 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.61□□□□□ -2.15
PKP2Q99959 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.61□□□□□ -2.15
PKP2Q99959 Y_RNA.117-201ENST00000363294 101 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 Y_RNA.257-201ENST00000364596 102 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 RNU6-407P-201ENST00000365280 104 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 RNU6-1289P-201ENST00000384431 106 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 Y_RNA.552-201ENST00000384665 112 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 RNU6-710P-201ENST00000410424 105 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 RNU2-14P-201ENST00000411053 191 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 RNU6-847P-201ENST00000411115 108 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.61□□□□□ -2.15
PKP2Q99959 HMGN2P34-201ENST00000437647 269 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 snoU13.9-201ENST00000458927 103 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 RPS26P55-201ENST00000471178 356 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 AC005840.1-201ENST00000498412 377 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 AC011406.1-201ENST00000512440 370 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.61□□□□□ -2.15
PKP2Q99959 AL162424.1-201ENST00000602325 221 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 AC141273.2-201ENST00000618989 130 ntBASIC1.61□□□□□ -2.15
PKP2Q99959 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
PKP2Q99959 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PKP2Q99959 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.65-201ENST00000362846 100 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.76-201ENST00000362931 109 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.82-201ENST00000363000 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.92-201ENST00000363043 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.172-201ENST00000363765 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 RNU6-801P-201ENST00000364087 105 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 RNU1-96P-201ENST00000364163 162 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 RNY1-201ENST00000364228 113 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.224-201ENST00000364308 111 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.235-201ENST00000364412 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.287-201ENST00000364853 94 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.306-201ENST00000365015 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.310-201ENST00000365063 113 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.312-201ENST00000365089 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.322-201ENST00000365151 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.368-201ENST00000365547 113 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 MIR7-2-201ENST00000384970 110 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 SNORA17.3-201ENST00000391159 129 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 MIR1267-201ENST00000408723 78 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 RNU6-855P-201ENST00000410395 104 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 AC099677.2-201ENST00000436385 175 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 HSPE1P13-201ENST00000451143 297 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.650-201ENST00000459002 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 AC005908.1-201ENST00000468701 347 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.6□□□□□ -2.15
PKP2Q99959 RNA5SP20-201ENST00000515976 84 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 RNU6-1041P-201ENST00000516254 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.777-201ENST00000516982 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 AC136628.3-201ENST00000521868 290 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 MIR4282-201ENST00000583613 67 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.771-201ENST00000598668 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.6□□□□□ -2.15
PKP2Q99959 AL353149.1-201ENST00000610667 244 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 Y_RNA.789-201ENST00000622480 102 ntBASIC1.6□□□□□ -2.15
PKP2Q99959 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.6□□□□□ -2.15
PKP2Q99959 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.6□□□□□ -2.15
PKP2Q99959 RNU6-1272P-201ENST00000362776 107 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 snoU2-30.2-201ENST00000362805 70 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 RNU6-1019P-201ENST00000364424 107 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 Y_RNA.341-201ENST00000365341 102 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 Y_RNA.456-201ENST00000384232 111 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 AL117342.1-201ENST00000404861 406 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 MIR1253-201ENST00000408273 105 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.59□□□□□ -2.15
PKP2Q99959 BTF3P4-201ENST00000418852 495 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 FTH1P12-201ENST00000432137 551 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 SNORD2.1-201ENST00000458762 69 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 Y_RNA.637-201ENST00000459424 114 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 RPS27P22-201ENST00000478056 241 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 RNU4-71P-201ENST00000516258 113 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 RNU6-1146P-201ENST00000516282 102 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 RNU6-1337P-201ENST00000516525 95 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.59□□□□□ -2.15
PKP2Q99959 AL137100.2-201ENST00000555786 315 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 MIR4438-201ENST00000585271 93 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 AC009779.6-201ENST00000603972 165 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 AL359821.1-201ENST00000605519 182 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 snoU18.1-201ENST00000629629 71 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 MIR338-201ENST00000636369 67 ntBASIC1.59□□□□□ -2.15
PKP2Q99959 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
PKP2Q99959 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms