Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC027279.3-201ENST00000625055 122 ntBASIC1.11□□□□□ -2.23
RAB40CQ96S21 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.1□□□□□ -2.23
RAB40CQ96S21 MTND4P29-201ENST00000503122 1372 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 U8.5-201ENST00000364528 136 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 Y_RNA.310-201ENST00000365063 113 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 Y_RNA.368-201ENST00000365547 113 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 SNORA63.7-201ENST00000365579 123 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 RNU6-474P-201ENST00000384243 107 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.1□□□□□ -2.23
RAB40CQ96S21 POLR2KP2-201ENST00000438155 177 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 U8.19-201ENST00000459095 133 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 Y_RNA.631-201ENST00000459607 101 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 AC114811.1-201ENST00000507207 168 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 RNU6-397P-201ENST00000516226 104 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 RNU7-40P-201ENST00000516397 64 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 RNU6-1046P-201ENST00000516538 107 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 MIR4762-201ENST00000585261 75 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.1□□□□□ -2.23
RAB40CQ96S21 Y_RNA.28-201ENST00000362554 111 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 RNU6-450P-201ENST00000364654 107 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 Y_RNA.383-201ENST00000383855 97 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 Y_RNA.394-201ENST00000383942 103 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 RNU6-1323P-201ENST00000384025 107 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 Y_RNA.645-201ENST00000391229 102 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 Y_RNA.604-201ENST00000410574 102 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 MLLT10P1-201ENST00000418346 262 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 SEPT14P8-201ENST00000508026 178 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 RNU7-116P-201ENST00000516940 62 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 Y_RNA.715-201ENST00000517082 110 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 RNU6-988P-201ENST00000519081 107 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.09□□□□□ -2.23
RAB40CQ96S21 AC136932.1-201ENST00000574771 208 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 AL357312.1-201ENST00000603879 298 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 SNORD113-5-201ENST00000607261 78 ntBASIC1.09□□□□□ -2.23
RAB40CQ96S21 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
RAB40CQ96S21 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
RAB40CQ96S21 Y_RNA.286-201ENST00000364813 102 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 MIR526A1-201ENST00000384897 85 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 MIR522-201ENST00000385071 87 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 RNU6-823P-201ENST00000391042 103 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 RNU6-101P-201ENST00000410323 104 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.08□□□□□ -2.24
RAB40CQ96S21 HMGN1P10-201ENST00000474557 553 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 AC010655.3-201ENST00000478818 450 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 HMGN1P7-201ENST00000491722 313 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 RNU6-947P-201ENST00000516264 106 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.08□□□□□ -2.24
RAB40CQ96S21 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.08□□□□□ -2.24
RAB40CQ96S21 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
RAB40CQ96S21 FAM106DP-201ENST00000586416 501 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 POLR3GP1-201ENST00000594073 261 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 AP000942.3-201ENST00000603702 160 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 AL645939.4-201ENST00000604495 135 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 MIR376A1-201ENST00000616574 68 ntBASIC1.08□□□□□ -2.24
RAB40CQ96S21 Y_RNA.128-201ENST00000363391 112 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 Y_RNA.389-201ENST00000383924 113 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 SNORA25-201ENST00000384384 134 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 MIR452-201ENST00000385020 85 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 AC068338.1-201ENST00000565567 176 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 MIR4300-201ENST00000581016 96 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 RAC1P9-201ENST00000604990 392 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 BX284668.6-201ENST00000606899 438 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 AL512598.1-201ENST00000610158 273 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.07□□□□□ -2.24
RAB40CQ96S21 AC134503.1-201ENST00000633048 54 ntBASIC1.07□□□□□ -2.24
RAB40CQ96S21 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RAB40CQ96S21 MIR378A-201ENST00000362177 66 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 RNU6-1084P-201ENST00000362498 107 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 RNU4-80P-201ENST00000363200 141 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 Y_RNA.138-201ENST00000363462 102 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 SNORD113-8-201ENST00000363497 74 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 Y_RNA.183-201ENST00000363882 113 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
RAB40CQ96S21 RNU6-131P-201ENST00000391144 107 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 MIR548P-201ENST00000408336 84 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 MTCO2P12-201ENST00000427426 682 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 SNRPGP10-201ENST00000432323 225 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 RPL39P39-201ENST00000455840 151 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 AC117454.1-201ENST00000491120 168 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 AC108729.3-201ENST00000513484 108 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 SNORA31.2-201ENST00000516019 134 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 Y_RNA.714-201ENST00000517065 90 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 Y_RNA.721-201ENST00000517207 102 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 AC024405.2-202ENST00000532731 184 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 MIR4303-201ENST00000581299 66 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 AC104695.3-201ENST00000604052 296 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 AP003357.1-201ENST00000604497 148 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 AL022345.2-201ENST00000606307 135 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 AC027335.2-201ENST00000624030 375 ntBASIC1.06□□□□□ -2.24
RAB40CQ96S21 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RAB40CQ96S21 RNU6-797P-201ENST00000363101 109 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 Y_RNA.336-201ENST00000365307 109 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 SNORA22B-201ENST00000383876 138 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 MIR1298-201ENST00000408783 112 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 MIR1252-201ENST00000408861 65 ntBASIC1.05□□□□□ -2.24
RAB40CQ96S21 Y_RNA.602-201ENST00000410535 92 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 270.5 ms