Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AL590491.3-201ENST00000610731 82 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 AC104010.1-201ENST00000616889 150 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 AC134878.1-201ENST00000619901 243 ntBASIC-1.06□□□□□ -2.58
IFT140Q96RY7 AL589826.1-201ENST00000340697 249 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 MIR655-201ENST00000362159 97 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 Y_RNA.399-201ENST00000383955 105 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 MIR873-201ENST00000401120 77 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 AC244250.2-201ENST00000418731 148 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-1.07□□□□□ -2.58
IFT140Q96RY7 RNU7-167P-201ENST00000459160 62 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 RNU7-138P-201ENST00000459479 64 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 uc_338.11-201ENST00000619132 160 ntBASIC-1.07□□□□□ -2.58
IFT140Q96RY7 RNU6-280P-201ENST00000364145 104 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 MIR588-201ENST00000384900 83 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 RNU6-131P-201ENST00000391144 107 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 SNORA3B-201ENST00000391305 131 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 RNU6-757P-201ENST00000410334 100 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 AL512286.1-201ENST00000439244 400 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 AC010424.1-201ENST00000506336 297 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 AC090572.1-201ENST00000519251 160 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.08□□□□□ -2.58
IFT140Q96RY7 uc_338.28-201ENST00000612082 187 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 AL512506.1-201ENST00000613918 449 ntBASIC-1.08□□□□□ -2.58
IFT140Q96RY7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.09□□□□□ -2.58
IFT140Q96RY7 SNORD114-14-201ENST00000362723 75 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 RNU6-784P-201ENST00000384330 106 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 MIR587-201ENST00000384845 96 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 RNU6-847P-201ENST00000411115 108 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 MTCO2P27-201ENST00000420740 428 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.09□□□□□ -2.58
IFT140Q96RY7 RNU6-410P-201ENST00000517006 107 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 AC105029.1-201ENST00000520250 669 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 MIR378D2-201ENST00000580636 98 ntBASIC-1.09□□□□□ -2.58
IFT140Q96RY7 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 SNORD38B-201ENST00000384690 67 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 SNORA75.4-201ENST00000391278 119 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.1□□□□□ -2.59
IFT140Q96RY7 AL138752.1-201ENST00000452964 351 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 SNORA70.25-201ENST00000612741 95 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.1□□□□□ -2.59
IFT140Q96RY7 AL133173.2-201ENST00000614270 90 ntBASIC-1.1□□□□□ -2.59
IFT140Q96RY7 RNU6-541P-201ENST00000384709 110 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 RNY1P7-201ENST00000384743 110 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 RNU4-83P-201ENST00000410863 133 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 MTATP6P20-201ENST00000414147 562 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 SSR1P2-201ENST00000415208 787 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 SNRPGP10-201ENST00000432323 225 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 AC093303.1-201ENST00000514549 295 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 RNU6-830P-201ENST00000516353 107 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 RNU7-181P-201ENST00000517234 74 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 LRRC34P1-201ENST00000542742 915 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-1.11□□□□□ -2.59
IFT140Q96RY7 MIR4703-201ENST00000577728 79 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 AC245008.1-201ENST00000608123 476 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 AL136370.1-201ENST00000608166 691 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 AC064836.2-201ENST00000609491 462 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 U2.17-201ENST00000611454 95 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 MIR8066-201ENST00000617280 78 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 AL158209.2-201ENST00000619266 216 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 AC009878.1-201ENST00000621819 340 ntBASIC-1.11□□□□□ -2.59
IFT140Q96RY7 RNA5SP205-201ENST00000364653 136 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 SNORA1.2-201ENST00000365189 134 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.12□□□□□ -2.59
IFT140Q96RY7 SNORA19.3-201ENST00000516165 130 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.12□□□□□ -2.59
IFT140Q96RY7 SCOCP1-201ENST00000554676 349 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.12□□□□□ -2.59
IFT140Q96RY7 AC010205.1-201ENST00000616668 449 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 ZNF299P-201ENST00000406845 1804 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 SNORD14E-201ENST00000364009 85 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 RNU6-660P-201ENST00000364566 109 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 MIR521-1-201ENST00000384902 87 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 SNORD93-201ENST00000408813 74 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 FCF1P9-201ENST00000412546 282 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-1.12□□□□□ -2.59
IFT140Q96RY7 snoU13.16-201ENST00000459350 104 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 RNU6-276P-201ENST00000516114 96 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.12□□□□□ -2.59
IFT140Q96RY7 AC069431.2-201ENST00000604149 1099 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 MIR6507-201ENST00000613630 70 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 AC105081.1-201ENST00000617727 106 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 AC084368.1-201ENST00000620935 65 ntBASIC-1.12□□□□□ -2.59
IFT140Q96RY7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.12□□□□□ -2.59
IFT140Q96RY7 RNU4-32P-201ENST00000363404 141 ntBASIC-1.13□□□□□ -2.59
IFT140Q96RY7 RNU6-740P-201ENST00000364734 105 ntBASIC-1.13□□□□□ -2.59
IFT140Q96RY7 RNU6-606P-201ENST00000384721 111 ntBASIC-1.13□□□□□ -2.59
IFT140Q96RY7 AC104850.1-201ENST00000435940 476 ntBASIC-1.13□□□□□ -2.59
IFT140Q96RY7 MTATP6P26-201ENST00000445926 662 ntBASIC-1.13□□□□□ -2.59
IFT140Q96RY7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms