Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR548A1-201ENST00000385041 97 ntBASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 AL603914.1-201ENST00000401964 204 ntBASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 RNA5SP170-201ENST00000517150 101 ntBASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 CYCSP26-201ENST00000534107 320 ntBASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 AC018630.3-201ENST00000542637 96 ntBASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 AC073413.2-201ENST00000604332 360 ntBASIC3.17□□□□□ -1.9
SYNGAP1Q96PV0 GABRG2-229ENST00000641017 3628 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 SNORD58C-201ENST00000365223 64 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 MIR518E-201ENST00000385252 88 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 RNA5SP127-201ENST00000411051 133 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 RPS15AP28-201ENST00000435088 386 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-1053P-201ENST00000515930 101 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 RNU6-781P-201ENST00000516377 101 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 MIR4662B-201ENST00000579498 81 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 MIR3613-201ENST00000579844 87 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 MIR3129-201ENST00000581095 76 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 MIR4506-201ENST00000584693 77 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 AL022345.2-201ENST00000606307 135 ntBASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SYNGAP1Q96PV0 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
SYNGAP1Q96PV0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.15□□□□□ -1.91
SYNGAP1Q96PV0 CYP2C59P-201ENST00000457790 269 ntBASIC3.15□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-1291P-201ENST00000516591 104 ntBASIC3.15□□□□□ -1.91
SYNGAP1Q96PV0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.15□□□□□ -1.91
SYNGAP1Q96PV0 MIR4498-201ENST00000577599 66 ntBASIC3.15□□□□□ -1.91
SYNGAP1Q96PV0 MIR4781-201ENST00000585250 76 ntBASIC3.15□□□□□ -1.91
SYNGAP1Q96PV0 U6.73-201ENST00000619194 103 ntBASIC3.15□□□□□ -1.91
SYNGAP1Q96PV0 MIR7157-201ENST00000635801 60 ntBASIC3.15□□□□□ -1.91
SYNGAP1Q96PV0 AC008555.8-201ENST00000623602 2168 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 Y_RNA.35-201ENST00000362601 101 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 Y_RNA.52-201ENST00000362760 96 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 RNU1-23P-201ENST00000363361 144 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-147P-201ENST00000383983 107 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 SNORA12.1-201ENST00000390873 148 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 U6atac.2-201ENST00000408644 118 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 RN7SKP123-201ENST00000410732 291 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 AC123900.1-201ENST00000420390 96 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 MTATP6P21-201ENST00000440681 189 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 MTCO1P44-201ENST00000441935 243 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-126P-201ENST00000516685 103 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 RNU2-60P-201ENST00000517290 128 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 AC004832.5-201ENST00000608677 401 ntBASIC3.14□□□□□ -1.91
SYNGAP1Q96PV0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 FAM35CP-201ENST00000554755 2470 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-1298P-201ENST00000362456 101 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 MIR562-201ENST00000384894 95 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 MIR520G-201ENST00000385064 90 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 MIR1263-201ENST00000408324 86 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 SNRPGP10-201ENST00000432323 225 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 Y_RNA.649-201ENST00000459077 103 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 RPS26P45-201ENST00000471748 340 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 RNA5SP385-201ENST00000515947 110 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-1146P-201ENST00000516282 102 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-1270P-201ENST00000517128 108 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 MIR4648-201ENST00000580107 72 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 AL355297.2-201ENST00000604792 129 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 AC025166.1-201ENST00000612411 163 ntBASIC3.13□□□□□ -1.91
SYNGAP1Q96PV0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 HMGN2P3-201ENST00000433603 273 ntBASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 HMGN2P5-201ENST00000436882 273 ntBASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 AC023141.11-201ENST00000508864 202 ntBASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 AC093259.1-201ENST00000509755 300 ntBASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 AC108729.3-201ENST00000513484 108 ntBASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-504P-201ENST00000516568 104 ntBASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.12□□□□□ -1.91
SYNGAP1Q96PV0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 Y_RNA.43-201ENST00000362670 111 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-1255P-201ENST00000363434 112 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 Y_RNA.280-201ENST00000364765 112 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-1138P-201ENST00000365359 106 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 Y_RNA.346-201ENST00000365385 112 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 MIR802-201ENST00000390235 94 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 RNU2-63P-201ENST00000410792 194 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 AC060773.1-201ENST00000421698 310 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 snoU13.18-201ENST00000459483 104 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 RN7SKP19-201ENST00000516016 252 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 RNU6-1041P-201ENST00000516254 102 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 AC097639.2-201ENST00000603159 172 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 U2.20-201ENST00000613956 192 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 MIR6817-201ENST00000615588 66 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.11□□□□□ -1.91
SYNGAP1Q96PV0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms