Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC116353.2-201ENST00000505332 712 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 MIR2355-201ENST00000517199 87 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 MIR4764-201ENST00000580680 88 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 RNU6-94P-201ENST00000607728 107 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 PISRT1.1-201ENST00000616930 107 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
RPRD1AQ96P16 RNU6-926P-201ENST00000384075 107 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 RNU6-1215P-201ENST00000384441 102 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 MIR598-201ENST00000384868 97 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 SNORA75.4-201ENST00000391278 119 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 MIR1277-201ENST00000408536 78 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 AC011352.1-201ENST00000512300 793 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.58□□□□□ -2.32
RPRD1AQ96P16 SNORD45.4-201ENST00000516629 73 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 RNU6-1213P-201ENST00000517075 94 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 AC240442.1-201ENST00000616055 283 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 7SK.10-201ENST00000621414 298 ntBASIC0.58□□□□□ -2.32
RPRD1AQ96P16 RNA5SP347-201ENST00000362445 119 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 RNA5SP48-201ENST00000363969 126 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 MIR15B-201ENST00000385045 98 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 RNU2-54P-201ENST00000410299 190 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 RNU2-61P-201ENST00000411069 191 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 MLLT10P1-201ENST00000418346 262 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 MTND4P28-201ENST00000426217 387 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 AC105313.1-201ENST00000509121 353 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 RNU6-120P-201ENST00000516077 103 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 RNU7-43P-201ENST00000516554 64 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 RNU6-307P-201ENST00000516743 106 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 AF235103.2-201ENST00000525753 346 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 AC036111.3-201ENST00000526389 112 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 AC006380.1-201ENST00000603598 186 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 AC002553.4-201ENST00000616896 331 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 AC087588.2-201ENST00000617667 426 ntBASIC0.57□□□□□ -2.32
RPRD1AQ96P16 SNORD123-201ENST00000459473 70 ntBASIC0.56□□□□□ -2.32
RPRD1AQ96P16 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.56□□□□□ -2.32
RPRD1AQ96P16 AC069439.1-201ENST00000494739 167 ntBASIC0.56□□□□□ -2.32
RPRD1AQ96P16 AC022616.4-201ENST00000522985 181 ntBASIC0.56□□□□□ -2.32
RPRD1AQ96P16 AP003484.1-201ENST00000530974 250 ntBASIC0.56□□□□□ -2.32
RPRD1AQ96P16 AC025627.3-201ENST00000582078 182 ntBASIC0.56□□□□□ -2.32
RPRD1AQ96P16 AC060780.3-201ENST00000589464 80 ntBASIC0.56□□□□□ -2.32
RPRD1AQ96P16 AL669831.3-213ENST00000636676 183 ntBASIC0.56□□□□□ -2.32
RPRD1AQ96P16 AL442644.1-201ENST00000454390 3105 ntBASIC0.56□□□□□ -2.32
RPRD1AQ96P16 RNU6-1084P-201ENST00000362498 107 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 SNORD116-4-201ENST00000384733 96 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 Y_RNA.592-201ENST00000410274 109 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 RNU6-1199P-201ENST00000411249 104 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 MRPS18CP6-201ENST00000423587 223 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 RPL30P15-201ENST00000457129 321 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 RNU6-1110P-201ENST00000516462 101 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 RNU6-966P-201ENST00000516479 104 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
RPRD1AQ96P16 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.55□□□□□ -2.32
RPRD1AQ96P16 SNORD50B-201ENST00000364995 70 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 snoU2-30.1-201ENST00000365012 70 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 SNORA69.1-201ENST00000390904 137 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 MIR1302-7-201ENST00000408841 72 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 AL392103.1-201ENST00000447000 198 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 CHEK2P4-201ENST00000450340 246 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 RNU6-1012P-201ENST00000516606 109 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 AL512605.2-201ENST00000592972 256 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.54□□□□□ -2.32
RPRD1AQ96P16 PVT1_3.1-201ENST00000620853 95 ntBASIC0.54□□□□□ -2.32
RPRD1AQ96P16 AC134026.1-201ENST00000623249 2239 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 RNU6-654P-201ENST00000364373 107 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 RNU4-14P-201ENST00000410858 122 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 RNU6-1304P-201ENST00000411374 106 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 HMGN2P32-201ENST00000444648 269 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 FCF1P4-201ENST00000448326 183 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
RPRD1AQ96P16 RNU6-436P-201ENST00000516171 114 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 AC005972.2-201ENST00000604690 348 ntBASIC0.53□□□□□ -2.32
RPRD1AQ96P16 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
RPRD1AQ96P16 RNU6-324P-201ENST00000363957 106 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 SNORA72-201ENST00000384339 132 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.577-201ENST00000384794 101 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 MIR625-201ENST00000385047 85 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 RNU6-131P-201ENST00000391144 107 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 SNORD111-201ENST00000408139 94 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 AC092628.1-201ENST00000436250 252 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.52□□□□□ -2.33
RPRD1AQ96P16 RNU6-155P-201ENST00000516347 100 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 RNU11-2P-201ENST00000516898 142 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.52□□□□□ -2.33
RPRD1AQ96P16 AC011712.1-201ENST00000588959 234 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 AC005176.2-201ENST00000596933 147 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 MIR6516-201ENST00000630554 81 ntBASIC0.52□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.72-201ENST00000362894 103 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 RNU6-20P-201ENST00000384106 107 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 Y_RNA.446-201ENST00000384178 104 ntBASIC0.51□□□□□ -2.33
RPRD1AQ96P16 MIR613-201ENST00000385248 95 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 758.2 ms