Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 Y_RNA.101-201ENST00000363154 102 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.116-201ENST00000363292 103 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 SNORD116-4-201ENST00000384733 96 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 MIR518E-201ENST00000385252 88 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 SNORD89-201ENST00000390981 114 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 SNORD99-201ENST00000408612 74 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 U8.19-201ENST00000459095 133 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 AC011352.1-201ENST00000512300 793 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 RNU6-1110P-201ENST00000516462 101 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 RNU11-2P-201ENST00000516898 142 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 AC087588.2-201ENST00000617667 426 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 MIR6788-201ENST00000618842 66 ntBASIC0.52□□□□□ -2.33
PKNOX2Q96KN3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.72-201ENST00000362894 103 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.172-201ENST00000363765 102 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 RNU6-926P-201ENST00000384075 107 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 RNU6-42P-201ENST00000384165 107 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.577-201ENST00000384794 101 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 SNORA69.1-201ENST00000390904 137 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.592-201ENST00000410274 109 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 MLLT10P1-201ENST00000418346 262 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 AC036111.3-201ENST00000526389 112 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 7SK.10-201ENST00000621414 298 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 AL442644.1-201ENST00000454390 3105 ntBASIC0.51□□□□□ -2.33
PKNOX2Q96KN3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 MIR625-201ENST00000385047 85 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 SNORD111-201ENST00000408139 94 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 AL390729.2-201ENST00000416137 156 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 HMGN2P32-201ENST00000444648 269 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 FCF1P4-201ENST00000448326 183 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 CHEK2P4-201ENST00000450340 246 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 SNORD123-201ENST00000459473 70 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 AC011712.1-201ENST00000588959 234 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 AC005972.2-201ENST00000604690 348 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 AL669831.3-213ENST00000636676 183 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 AC134026.1-201ENST00000623249 2239 ntBASIC0.5□□□□□ -2.33
PKNOX2Q96KN3 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 SNORD50B-201ENST00000364995 70 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 SNORA72-201ENST00000384339 132 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 RNY1P14-201ENST00000384426 108 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 RNU6-131P-201ENST00000391144 107 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 MIR548J-201ENST00000408833 112 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 RNU6-1156P-201ENST00000410365 100 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 RNU6-1199P-201ENST00000411249 104 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 AC067940.1-201ENST00000458411 300 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 snoU13.18-201ENST00000459483 104 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 RNU6-1012P-201ENST00000516606 109 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 AC060780.3-201ENST00000589464 80 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 AC005176.2-201ENST00000596933 147 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 RNU6-94P-201ENST00000607728 107 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 AL136317.1-201ENST00000612653 226 ntBASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.49□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.6-201ENST00000362350 114 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.446-201ENST00000384178 104 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 RNY3P4-201ENST00000384428 101 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.508-201ENST00000384502 114 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 MTND1P4-201ENST00000435196 415 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 AL392103.1-201ENST00000447000 198 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 AC069439.1-201ENST00000494739 167 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 RNU6-436P-201ENST00000516171 114 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.673-201ENST00000516306 88 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 RNU6-358P-201ENST00000516564 75 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 RNU7-30P-201ENST00000516835 62 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 RNU6-1213P-201ENST00000517075 94 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 MIR6516-201ENST00000630554 81 ntBASIC0.48□□□□□ -2.33
PKNOX2Q96KN3 RNU6-324P-201ENST00000363957 106 ntBASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 RNU6-20P-201ENST00000384106 107 ntBASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 SNRPGP10-201ENST00000432323 225 ntBASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 RNU6-155P-201ENST00000516347 100 ntBASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.47□□□□□ -2.33
PKNOX2Q96KN3 RNU6-626P-201ENST00000363354 107 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 SNORD113.3-201ENST00000364630 78 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 MIR1302-7-201ENST00000408841 72 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 RNU6-994P-201ENST00000410507 111 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 RNU6-1304P-201ENST00000411374 106 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 RNU6-120P-201ENST00000516077 103 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 RNU6-264P-201ENST00000517134 104 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 MIR5000-201ENST00000577717 103 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 SNORA4-201ENST00000584302 138 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 RMST_2.1-201ENST00000617263 136 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 AC008133.2-201ENST00000624540 351 ntBASIC0.46□□□□□ -2.34
PKNOX2Q96KN3 MIR4251-201ENST00000635819 61 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 282.3 ms