| CNRIP1 | Q96F85 | Y_RNA.267-201 | ENST00000364679 | 109 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | SNORA72.4-201 | ENST00000384174 | 132 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | SNORA72-201 | ENST00000384339 | 132 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR30A-201 | ENST00000385092 | 71 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MT-TW-201 | ENST00000387382 | 68 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU6ATAC19P-201 | ENST00000408096 | 110 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AL354695.1-201 | ENST00000427935 | 228 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC104332.1-201 | ENST00000440471 | 797 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | snoU13.23-201 | ENST00000458863 | 104 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU7-115P-201 | ENST00000516433 | 55 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | SNORA44.1-201 | ENST00000517031 | 108 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | SNORA31.24-201 | ENST00000517232 | 57 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC011604.1-201 | ENST00000545978 | 196 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR3198-2-201 | ENST00000577868 | 80 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR4303-201 | ENST00000581299 | 66 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC037487.3-201 | ENST00000606668 | 112 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC021506.2-201 | ENST00000612354 | 169 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR7843-201 | ENST00000622274 | 79 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC068647.2-201 | ENST00000637380 | 353 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | U6.104-201 | ENST00000637979 | 90 nt | BASIC | 1.37 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | HIF1A-212 | ENST00000557538 | 3468 nt | TSL 1 (best) BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AP000648.3-201 | ENST00000623539 | 4507 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | FABP12-201 | ENST00000360464 | 551 nt | APPRIS P1 TSL 1 (best) BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | SNORA25.1-201 | ENST00000362326 | 128 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | Y_RNA.461-201 | ENST00000384263 | 103 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR568-201 | ENST00000385036 | 95 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNA5SP482-201 | ENST00000391269 | 118 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AL034345.1-201 | ENST00000407768 | 123 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR1302-6-201 | ENST00000408466 | 90 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC018511.2-201 | ENST00000413431 | 189 nt | TSL 3 BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AL353743.2-204 | ENST00000456242 | 419 nt | TSL 3 BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | U8.19-201 | ENST00000459095 | 133 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC091959.1-201 | ENST00000495857 | 238 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | OR9P1P-201 | ENST00000496431 | 281 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | SNORA27.4-201 | ENST00000516650 | 95 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU2-56P-201 | ENST00000516826 | 190 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AP003097.2-201 | ENST00000530126 | 178 nt | TSL 3 BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AP003715.1-201 | ENST00000532109 | 435 nt | TSL 3 BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | DEFB122-202 | ENST00000569013 | 197 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AL122017.1-202 | ENST00000570612 | 319 nt | TSL 5 BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR4298-201 | ENST00000584380 | 73 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC100781.1-201 | ENST00000597142 | 383 nt | TSL 3 BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | ST7-OT4_1.1-201 | ENST00000615322 | 200 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC095038.3-201 | ENST00000634439 | 195 nt | BASIC | 1.36 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | ASPN-202 | ENST00000375544 | 2470 nt | APPRIS P1 TSL 1 (best) BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU6-1123P-201 | ENST00000362347 | 106 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU6-457P-201 | ENST00000363999 | 107 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | Y_RNA.217-201 | ENST00000364214 | 105 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU6-514P-201 | ENST00000384208 | 107 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | Y_RNA.483-201 | ENST00000384380 | 101 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | SNORA17.3-201 | ENST00000391159 | 129 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | SNORA26.5-201 | ENST00000391215 | 123 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU2-14P-201 | ENST00000411053 | 191 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MTND3P2-201 | ENST00000438452 | 342 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | STAG3L5P-204 | ENST00000443759 | 179 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU7-34P-201 | ENST00000459394 | 64 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | Y_RNA.641-201 | ENST00000459414 | 105 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC008834.1-201 | ENST00000511612 | 175 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | DEFB108E-201 | ENST00000524692 | 240 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC024405.2-202 | ENST00000532731 | 184 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC015712.3-201 | ENST00000559380 | 164 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC127455.1-201 | ENST00000565496 | 145 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AL512605.2-201 | ENST00000592972 | 256 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | POLR3GP1-201 | ENST00000594073 | 261 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR548AY-201 | ENST00000617669 | 107 nt | BASIC | 1.35 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | MIR424-201 | ENST00000362227 | 98 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | Y_RNA.237-201 | ENST00000364439 | 102 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | U8.7-201 | ENST00000364940 | 136 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | Y_RNA.396-201 | ENST00000383949 | 103 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | Y_RNA.556-201 | ENST00000384677 | 113 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC004965.1-201 | ENST00000413033 | 213 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC233266.1-201 | ENST00000454518 | 96 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | RNU7-141P-201 | ENST00000459304 | 62 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | Y_RNA.637-201 | ENST00000459424 | 114 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AL049830.1-201 | ENST00000468034 | 425 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC242852.1-201 | ENST00000612151 | 96 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC073349.3-201 | ENST00000617616 | 186 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AL513423.1-201 | ENST00000621695 | 132 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | KCNQ1OT1_5.1-201 | ENST00000621902 | 226 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC244015.1-201 | ENST00000622301 | 99 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AC131280.1-202 | ENST00000624067 | 4211 nt | BASIC | 1.34 | □□□□□ -2.19 | | |
| CNRIP1 | Q96F85 | AL391987.6-201 | ENST00000305671 | 199 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | MIR302D-201 | ENST00000362275 | 68 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | RNU6-1272P-201 | ENST00000362776 | 107 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | U8.1-201 | ENST00000362843 | 134 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | RNU4-41P-201 | ENST00000364426 | 143 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | Y_RNA.265-201 | ENST00000364677 | 108 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | RNU6-1080P-201 | ENST00000383982 | 107 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | RNU6-763P-201 | ENST00000390865 | 106 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | 5S_rRNA.2-201 | ENST00000391293 | 112 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | Z98949.2-201 | ENST00000440996 | 144 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | PGBD4P5-201 | ENST00000445958 | 426 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | AC117454.1-201 | ENST00000491120 | 168 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | RNA5SP61-201 | ENST00000516453 | 100 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | AC015688.6-201 | ENST00000577737 | 104 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | MIR4762-201 | ENST00000585261 | 75 nt | BASIC | 1.33 | □□□□□ -2.2 | | |
| CNRIP1 | Q96F85 | AC068733.3-201 | ENST00000632757 | 269 nt | TSL 3 BASIC | 1.33 | □□□□□ -2.2 | | |