Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 SNORD11-201ENST00000459124 84 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 RPL23AP91-201ENST00000569211 455 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 MIR4672-201ENST00000583126 81 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
PTCD3Q96EY7 AL136360.1-201ENST00000503377 1900 ntBASIC2.27□□□□□ -2.05
PTCD3Q96EY7 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
PTCD3Q96EY7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTCD3Q96EY7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PTCD3Q96EY7 RNU6-1209P-201ENST00000363655 107 ntBASIC2.26□□□□□ -2.05
PTCD3Q96EY7 RNU6-484P-201ENST00000384016 107 ntBASIC2.26□□□□□ -2.05
PTCD3Q96EY7 AL512604.1-201ENST00000404812 257 ntBASIC2.26□□□□□ -2.05
PTCD3Q96EY7 EDDM3CP-201ENST00000415977 425 ntBASIC2.26□□□□□ -2.05
PTCD3Q96EY7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.26□□□□□ -2.05
PTCD3Q96EY7 AC007229.1-201ENST00000590455 412 ntBASIC2.26□□□□□ -2.05
PTCD3Q96EY7 AC022202.1-201ENST00000613515 211 ntBASIC2.26□□□□□ -2.05
PTCD3Q96EY7 AL449363.1-201ENST00000617815 186 ntBASIC2.26□□□□□ -2.05
PTCD3Q96EY7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PTCD3Q96EY7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
PTCD3Q96EY7 RNA5SP493-201ENST00000364115 91 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 Y_RNA.291-201ENST00000364886 113 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.25□□□□□ -2.05
PTCD3Q96EY7 RNU7-197P-201ENST00000458836 62 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 YWHAEP4-201ENST00000505390 198 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 SNORA25.12-201ENST00000516202 82 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 CYCSP26-201ENST00000534107 320 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 MIR3169-201ENST00000578032 83 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 MIR5007-201ENST00000583098 95 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 AL359075.3-201ENST00000613288 217 ntBASIC2.25□□□□□ -2.05
PTCD3Q96EY7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.25□□□□□ -2.05
PTCD3Q96EY7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.24□□□□□ -2.05
PTCD3Q96EY7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 RNU6-160P-201ENST00000384591 107 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 RNU6-959P-201ENST00000384671 107 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 MIR562-201ENST00000384894 95 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 MIR520G-201ENST00000385064 90 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 RNA5SP338-201ENST00000410495 85 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 RN7SKP284-201ENST00000411002 343 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 RNU2-55P-201ENST00000411146 174 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 AC090255.1-201ENST00000495779 349 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 RPS29P21-201ENST00000496272 170 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 RN7SL636P-201ENST00000497504 294 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.24□□□□□ -2.05
PTCD3Q96EY7 AC046143.2-201ENST00000609789 160 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 uc_338.4-201ENST00000616635 176 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 AC091895.1-201ENST00000624494 256 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 AC022513.1-201ENST00000624512 117 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 AC010332.2-201ENST00000613083 1904 ntBASIC2.24□□□□□ -2.05
PTCD3Q96EY7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PTCD3Q96EY7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PTCD3Q96EY7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.23□□□□□ -2.05
PTCD3Q96EY7 RNA5SP37-201ENST00000365420 130 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 Y_RNA.393-201ENST00000383936 102 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 RNU1-52P-201ENST00000384190 164 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 SNORA20-201ENST00000384662 132 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 MIR524-201ENST00000385242 87 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 RPS15AP28-201ENST00000435088 386 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 AC099677.2-201ENST00000436385 175 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.23□□□□□ -2.05
PTCD3Q96EY7 RPS27P1-201ENST00000450552 247 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 AC092991.1-201ENST00000477176 376 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 SNORD77.4-201ENST00000516158 81 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 RNU6-197P-201ENST00000516680 100 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 AC112693.2-201ENST00000556538 232 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.23□□□□□ -2.05
PTCD3Q96EY7 MIR2681-201ENST00000581814 105 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 MIR6766-201ENST00000622641 72 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 MIR6079-201ENST00000635807 62 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 MIR203B-201ENST00000636080 86 ntBASIC2.23□□□□□ -2.05
PTCD3Q96EY7 AC018630.2-201ENST00000534866 2403 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 RNU6-862P-201ENST00000362804 105 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 RNU6-1082P-201ENST00000364574 107 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 RNU6-301P-201ENST00000384277 107 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 RNU1-148P-201ENST00000384472 162 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 Y_RNA.521-201ENST00000384560 114 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 RNU6-588P-201ENST00000410281 105 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 CYCSP49-201ENST00000420810 319 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 MTND4LP9-201ENST00000427694 174 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.22□□□□□ -2.05
PTCD3Q96EY7 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 RPS26P45-201ENST00000471748 340 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 NDUFA4P2-201ENST00000489989 244 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 RNU1-142P-201ENST00000516682 145 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 AL160236.1-201ENST00000556317 195 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 MIR3646-201ENST00000578301 84 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 MIR378D2-201ENST00000580636 98 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 MIR6844-201ENST00000637122 62 ntBASIC2.22□□□□□ -2.05
PTCD3Q96EY7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.05
PTCD3Q96EY7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PTCD3Q96EY7 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
PTCD3Q96EY7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PTCD3Q96EY7 Y_RNA.91-201ENST00000363042 107 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 RNU6-978P-201ENST00000364371 103 ntBASIC2.21□□□□□ -2.06
PTCD3Q96EY7 RNU6-1336P-201ENST00000383886 109 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 409.9 ms