Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 RPS4XP11-201ENST00000446897 772 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.650-201ENST00000459002 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 RNU7-141P-201ENST00000459304 62 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 AC079804.2-201ENST00000490376 200 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 RNU7-115P-201ENST00000516433 55 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 SNORA25.15-201ENST00000516487 89 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 RNU6-341P-201ENST00000516973 96 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.777-201ENST00000516982 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 POLR3GP1-201ENST00000594073 261 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.771-201ENST00000598668 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.789-201ENST00000622480 102 ntBASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM43Q96BQ3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.65-201ENST00000362846 100 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.267-201ENST00000364679 109 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AL512604.1-201ENST00000404812 257 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 RNU2-14P-201ENST00000411053 191 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AC245047.3-201ENST00000429428 127 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AC233266.1-201ENST00000454518 96 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.637-201ENST00000459424 114 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AC117454.1-201ENST00000491120 168 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AC024405.2-202ENST00000532731 184 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AP003357.1-201ENST00000604497 148 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 MIR8081-201ENST00000611533 95 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AC242852.1-201ENST00000612151 96 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 AC244015.1-201ENST00000622301 99 ntBASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.116-201ENST00000363292 103 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 U8.7-201ENST00000364940 136 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 RNU6-211P-201ENST00000384047 107 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 SNORA72-201ENST00000384339 132 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 RNA5SP109-201ENST00000391010 116 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 AL158823.1-201ENST00000418441 478 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 U8.19-201ENST00000459095 133 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 RPL23AP54-201ENST00000495129 419 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 RNU2-56P-201ENST00000516826 190 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 AC091178.2-201ENST00000584401 117 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 AC013791.1-201ENST00000616619 62 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 AC073349.3-201ENST00000617616 186 ntBASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRIM43Q96BQ3 WWP1P1-201ENST00000466609 2769 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 RNU6-112P-201ENST00000363599 104 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 SNORA63D-201ENST00000364359 132 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 RNU6-950P-201ENST00000384651 107 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 RNU4-71P-201ENST00000516258 113 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 AC011604.1-201ENST00000545978 196 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 AC127455.1-201ENST00000565496 145 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 MIR4303-201ENST00000581299 66 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 AC022217.4-201ENST00000604389 163 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 AL008718.3-201ENST00000610217 321 ntBASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM43Q96BQ3 AC100821.1-201ENST00000523153 2479 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.122-201ENST00000363331 96 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 RNU6-379P-201ENST00000363813 104 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.293-201ENST00000364908 93 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 RNU6-338P-201ENST00000383888 105 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.466-201ENST00000384294 113 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.539-201ENST00000384635 107 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 RNA5SP212-201ENST00000391223 107 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 SNORA36B-201ENST00000410438 131 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 RNA5SP100-201ENST00000410903 110 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 RNA5SP59-201ENST00000410922 110 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 RNU6-651P-201ENST00000411040 105 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 SNORD2.1-201ENST00000458762 69 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 RNA5SP481-201ENST00000516814 122 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 RNU6-111P-201ENST00000517179 105 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 AP002004.2-201ENST00000531656 154 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 MIR4643-201ENST00000577473 78 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 MIR5692C2-201ENST00000577959 77 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 AL442067.1-201ENST00000613261 223 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 AC084768.2-201ENST00000622736 221 ntBASIC2.1□□□□□ -2.07
TRIM43Q96BQ3 Y_RNA.552-201ENST00000384665 112 ntBASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 MIR518E-201ENST00000385252 88 ntBASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 AL606517.2-201ENST00000442855 241 ntBASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 RPS27P1-201ENST00000450552 247 ntBASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 AL358944.1-201ENST00000528537 144 ntBASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.09□□□□□ -2.07
TRIM43Q96BQ3 MIR4282-201ENST00000583613 67 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 272.5 ms