Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 RNU6-710P-201ENST00000410424 105 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 PIGPP3-201ENST00000425307 415 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 SNORA31.2-201ENST00000516019 134 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 AC090821.2-201ENST00000523552 176 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 MIR3660-201ENST00000584845 100 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 AL357312.1-201ENST00000603879 298 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 AL080274.1-201ENST00000605565 220 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
LHX4Q969G2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
LHX4Q969G2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
LHX4Q969G2 SNORD81.1-201ENST00000363064 77 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 Y_RNA.112-201ENST00000363250 102 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 Y_RNA.253-201ENST00000364562 112 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 SNORA72-201ENST00000384339 132 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 Y_RNA.526-201ENST00000384572 110 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 RNU6-855P-201ENST00000410395 104 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 RNU6-1054P-201ENST00000411293 104 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 HMGN1P7-201ENST00000491722 313 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 AC093852.1-201ENST00000503587 266 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 AC114811.1-201ENST00000507207 168 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 RNU6-475P-201ENST00000516073 104 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 AC006157.1-201ENST00000611750 366 ntBASIC1.01□□□□□ -2.25
LHX4Q969G2 RNU1-124P-201ENST00000363861 145 ntBASIC1□□□□□ -2.25
LHX4Q969G2 Y_RNA.238-201ENST00000364441 102 ntBASIC1□□□□□ -2.25
LHX4Q969G2 Y_RNA.395-201ENST00000383945 109 ntBASIC1□□□□□ -2.25
LHX4Q969G2 Y_RNA.439-201ENST00000384119 94 ntBASIC1□□□□□ -2.25
LHX4Q969G2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1□□□□□ -2.25
LHX4Q969G2 AC245047.7-201ENST00000440265 293 ntBASIC1□□□□□ -2.25
LHX4Q969G2 AC048334.1-201ENST00000477975 159 ntBASIC1□□□□□ -2.25
LHX4Q969G2 RPS23P4-201ENST00000487908 423 ntBASIC1□□□□□ -2.25
LHX4Q969G2 SNORA31.4-201ENST00000516049 129 ntBASIC1□□□□□ -2.25
LHX4Q969G2 SNORD116-28-201ENST00000516123 91 ntBASIC1□□□□□ -2.25
LHX4Q969G2 AC040926.1-201ENST00000530195 238 ntBASIC1□□□□□ -2.25
LHX4Q969G2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1□□□□□ -2.25
LHX4Q969G2 FAM106DP-201ENST00000586416 501 ntBASIC1□□□□□ -2.25
LHX4Q969G2 DEFB117-201ENST00000602356 141 ntBASIC1□□□□□ -2.25
LHX4Q969G2 HSPE1P19-201ENST00000603327 295 ntBASIC1□□□□□ -2.25
LHX4Q969G2 BX284668.6-201ENST00000606899 438 ntBASIC1□□□□□ -2.25
LHX4Q969G2 AC011373.1-201ENST00000607270 237 ntBASIC1□□□□□ -2.25
LHX4Q969G2 AL050343.2-201ENST00000607338 280 ntBASIC1□□□□□ -2.25
LHX4Q969G2 uc_338.22-201ENST00000622722 187 ntBASIC1□□□□□ -2.25
LHX4Q969G2 AL008636.1-201ENST00000625038 1018 ntBASIC1□□□□□ -2.25
LHX4Q969G2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1□□□□□ -2.25
LHX4Q969G2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
LHX4Q969G2 Y_RNA.310-201ENST00000365063 113 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 Y_RNA.336-201ENST00000365307 109 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 RNU6-53P-201ENST00000365367 106 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 Y_RNA.368-201ENST00000365547 113 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 SNORD63-201ENST00000384262 68 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 Y_RNA.551-201ENST00000384661 102 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 MIR522-201ENST00000385071 87 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 AL590004.1-201ENST00000405321 300 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 U8.19-201ENST00000459095 133 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 U8.20-201ENST00000459445 131 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 RNU6-1170P-201ENST00000515974 106 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 RNU7-110P-201ENST00000516891 62 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 Y_RNA.713-201ENST00000517013 96 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LHX4Q969G2 AC007485.1-201ENST00000616755 206 ntBASIC0.99□□□□□ -2.25
LHX4Q969G2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
LHX4Q969G2 RNU4-50P-201ENST00000364361 141 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 Y_RNA.341-201ENST00000365341 102 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 RNU6-1323P-201ENST00000384025 107 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 Y_RNA.456-201ENST00000384232 111 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 Y_RNA.471-201ENST00000384312 102 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 RNU6-937P-201ENST00000384325 106 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 MIR452-201ENST00000385020 85 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 MIR1302-11-201ENST00000408051 138 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 MIR1302-9-201ENST00000408365 138 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 MIR1302-10-201ENST00000408734 138 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 RNU6-130P-201ENST00000411112 103 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.98□□□□□ -2.25
LHX4Q969G2 MTND4LP11-201ENST00000422184 280 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 RPL39P39-201ENST00000455840 151 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 RNU6-947P-201ENST00000516264 106 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 SNORA70.22-201ENST00000517160 124 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 MIR1302-2-201ENST00000607096 138 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 PART1_1.1-201ENST00000611761 217 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 MIR8070-201ENST00000616510 88 ntBASIC0.98□□□□□ -2.25
LHX4Q969G2 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
LHX4Q969G2 SNORD42.2-201ENST00000365570 69 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 RNU6-910P-201ENST00000390844 107 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 MIR1298-201ENST00000408783 112 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 RNU4-30P-201ENST00000410245 143 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 AC022028.1-201ENST00000412054 408 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 LINC01399-202ENST00000458450 244 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 Y_RNA.639-201ENST00000458981 102 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 SNORD111.1-201ENST00000516421 86 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 AL096861.1-201ENST00000610899 123 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 AC012676.2-201ENST00000619258 186 ntBASIC0.97□□□□□ -2.25
LHX4Q969G2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.97□□□□□ -2.25
LHX4Q969G2 MIR369-201ENST00000362155 70 ntBASIC0.96□□□□□ -2.26
LHX4Q969G2 Y_RNA.143-201ENST00000363520 106 ntBASIC0.96□□□□□ -2.26
LHX4Q969G2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms