Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.13□□□□□ -2.23
CKAP2Q8WWK9 AL357312.1-201ENST00000603879 298 ntBASIC1.13□□□□□ -2.23
CKAP2Q8WWK9 AL121655.1-201ENST00000605811 308 ntBASIC1.13□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.4-201ENST00000362333 112 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.341-201ENST00000365341 102 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.439-201ENST00000384119 94 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.462-201ENST00000384268 102 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 RNU6-937P-201ENST00000384325 106 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 RNU6-710P-201ENST00000410424 105 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 AL390729.2-201ENST00000416137 156 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 RPL39P39-201ENST00000455840 151 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 SNORA70.22-201ENST00000517160 124 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 AC022616.4-201ENST00000522985 181 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 MIR4781-201ENST00000585250 76 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 DEFB117-201ENST00000602356 141 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 AL080274.1-201ENST00000605565 220 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 AC011373.1-201ENST00000607270 237 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 MIR6078-201ENST00000611069 100 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 AC007485.1-201ENST00000616755 206 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 AC027279.3-201ENST00000625055 122 ntBASIC1.12□□□□□ -2.23
CKAP2Q8WWK9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.143-201ENST00000363520 106 ntBASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.253-201ENST00000364562 112 ntBASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.471-201ENST00000384312 102 ntBASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 RNU6-910P-201ENST00000390844 107 ntBASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 MTATP6P23-201ENST00000440153 476 ntBASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 U8.20-201ENST00000459445 131 ntBASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 AL133255.1-201ENST00000606374 441 ntBASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 AL008636.1-201ENST00000625038 1018 ntBASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CKAP2Q8WWK9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 SNORD81.1-201ENST00000363064 77 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.419-201ENST00000384041 102 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 SNORA72-201ENST00000384339 132 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.526-201ENST00000384572 110 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 AL590004.1-201ENST00000405321 300 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 RNU4-30P-201ENST00000410245 143 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 RPS23P4-201ENST00000487908 423 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 RNU6-1170P-201ENST00000515974 106 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 SNORA31.4-201ENST00000516049 129 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 SNORD116-28-201ENST00000516123 91 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 MIR3145-201ENST00000580727 82 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 LARP7P1-201ENST00000605576 316 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 AC027335.2-201ENST00000624030 375 ntBASIC1.1□□□□□ -2.23
CKAP2Q8WWK9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 MIR369-201ENST00000362155 70 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 U8.5-201ENST00000364528 136 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 RNU6-21P-201ENST00000384710 107 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 MTND4LP11-201ENST00000422184 280 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 AC245047.7-201ENST00000440265 293 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 LINC01399-202ENST00000458450 244 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 AC040926.1-201ENST00000530195 238 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 AP001094.1-201ENST00000579805 193 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 MIR4762-201ENST00000585261 75 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 HSPE1P19-201ENST00000603327 295 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 uc_338.22-201ENST00000622722 187 ntBASIC1.09□□□□□ -2.23
CKAP2Q8WWK9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CKAP2Q8WWK9 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 RNU4-50P-201ENST00000364361 141 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 Y_RNA.310-201ENST00000365063 113 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 SNORD14.1-201ENST00000365609 90 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 Y_RNA.551-201ENST00000384661 102 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 MIR452-201ENST00000385020 85 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 MIR522-201ENST00000385071 87 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 MIR516B2-201ENST00000385190 85 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 MIR1298-201ENST00000408783 112 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 AC022028.1-201ENST00000412054 408 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 AC024067.1-201ENST00000426199 223 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 HMGN1P7-201ENST00000491722 313 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 Y_RNA.713-201ENST00000517013 96 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 POLR3GP1-201ENST00000594073 261 ntBASIC1.08□□□□□ -2.24
CKAP2Q8WWK9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 Y_RNA.112-201ENST00000363250 102 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 SNORA22-201ENST00000383907 134 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 SNORA22C-201ENST00000384614 134 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 RNU6-308P-201ENST00000390957 107 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 RNU6-131P-201ENST00000391144 107 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 SNRPGP10-201ENST00000432323 225 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 SNORD111.1-201ENST00000516421 86 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 SNORD45.4-201ENST00000516629 73 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 AC091895.1-201ENST00000624494 256 ntBASIC1.07□□□□□ -2.24
CKAP2Q8WWK9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms