Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 Y_RNA.579-201ENST00000390939 94 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 AL031003.1-201ENST00000404229 172 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 HSPE1P9-201ENST00000440046 311 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 AC112492.4-201ENST00000456549 352 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 AL049830.1-201ENST00000468034 425 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 SNORA25.10-201ENST00000515926 124 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 RNU6-966P-201ENST00000516479 104 ntBASIC0.81□□□□□ -2.28
SHROOM3Q8TF72 RNU6-879P-201ENST00000364328 108 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 RNU6-950P-201ENST00000384651 107 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.570-201ENST00000384750 101 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 MIR562-201ENST00000384894 95 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 AC008134.1-201ENST00000420943 193 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 RPL26P26-201ENST00000480251 434 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 AC025465.3-201ENST00000510570 311 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 RNU6-1170P-201ENST00000515974 106 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 RNA5SP20-201ENST00000515976 84 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 AC013244.2-201ENST00000603396 103 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 C8orf59P2-201ENST00000603441 271 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 AL121655.1-201ENST00000605811 308 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 AL133255.1-201ENST00000606374 441 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 AC138305.3-201ENST00000624988 240 ntBASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.8□□□□□ -2.28
SHROOM3Q8TF72 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.61-201ENST00000362835 102 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.143-201ENST00000363520 106 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.265-201ENST00000364677 108 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU1-115P-201ENST00000365329 160 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU6-439P-201ENST00000384188 106 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 SNORA20B-201ENST00000384220 132 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.518-201ENST00000384552 113 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU6-296P-201ENST00000384608 107 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 MIR559-201ENST00000385188 96 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 SNORA12.1-201ENST00000390873 148 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU6-130P-201ENST00000411112 103 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 MTND4P19-201ENST00000446659 478 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AC005042.3-201ENST00000453230 174 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU6-1337P-201ENST00000516525 95 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.715-201ENST00000517082 110 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU2-12P-201ENST00000517216 168 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AC023442.1-201ENST00000531247 422 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 MIR4422-201ENST00000581938 83 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AL162424.1-201ENST00000602325 221 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AC092447.9-201ENST00000603395 144 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AC096720.1-201ENST00000604441 183 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 U6.73-201ENST00000619194 103 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AC134503.1-201ENST00000633048 54 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 HSBP1P2-201ENST00000299671 229 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.5-201ENST00000362334 102 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.243-201ENST00000364481 109 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU5E-4P-201ENST00000364931 120 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU6-1175P-201ENST00000365200 107 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.329-201ENST00000365209 107 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.535-201ENST00000384612 99 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 MRPL35P3-201ENST00000421557 364 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU6-229P-201ENST00000516614 102 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 RNU7-4P-201ENST00000516961 62 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 MIR3145-201ENST00000580727 82 ntBASIC0.79□□□□□ -2.28
SHROOM3Q8TF72 MIRLET7C-201ENST00000362160 84 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 Y_RNA.101-201ENST00000363154 102 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 RNU6-117P-201ENST00000365415 107 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 RNU6-338P-201ENST00000383888 105 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 RNA5SP109-201ENST00000391010 116 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 AL161935.2-201ENST00000414627 60 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 PIGPP3-201ENST00000425307 415 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 SUMO1P2-201ENST00000452524 304 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 RNU7-99P-201ENST00000516271 62 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 AC005176.2-201ENST00000596933 147 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 AC004467.1-201ENST00000615678 330 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 AC106754.2-201ENST00000623006 233 ntBASIC0.78□□□□□ -2.28
SHROOM3Q8TF72 RNA5SP259-201ENST00000365541 109 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.368-201ENST00000365547 113 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.383-201ENST00000383855 97 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 RNU6-1009P-201ENST00000390996 107 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 AL160004.2-201ENST00000432935 350 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 AP002004.2-201ENST00000531656 154 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 AL080274.1-201ENST00000605565 220 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 AL121890.5-201ENST00000620848 304 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 SNORA63.7-201ENST00000365579 123 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.394-201ENST00000383942 103 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 Y_RNA.412-201ENST00000384001 104 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 RNU6-20P-201ENST00000384106 107 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 HSPE1P21-201ENST00000438283 308 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 PGBD4P5-201ENST00000445958 426 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 OR9P1P-201ENST00000496431 281 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 RNU6-397P-201ENST00000516226 104 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 RNU6-1046P-201ENST00000516538 107 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 RNU6-165P-201ENST00000517170 99 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 RNU7-128P-201ENST00000517247 62 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 MIR4659A-201ENST00000580269 81 ntBASIC0.77□□□□□ -2.29
SHROOM3Q8TF72 MIR2909-201ENST00000617113 69 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms