Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 U8.7-201ENST00000364940 136 ntBASIC2.56□□□□□ -2
SMC1BQ8NDV3 SNORA8-201ENST00000384574 139 ntBASIC2.56□□□□□ -2
SMC1BQ8NDV3 MIR520G-201ENST00000385064 90 ntBASIC2.56□□□□□ -2
SMC1BQ8NDV3 Y_RNA.644-201ENST00000459006 113 ntBASIC2.56□□□□□ -2
SMC1BQ8NDV3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.56□□□□□ -2
SMC1BQ8NDV3 Y_RNA.674-201ENST00000516362 113 ntBASIC2.56□□□□□ -2
SMC1BQ8NDV3 AC127455.1-201ENST00000565496 145 ntBASIC2.56□□□□□ -2
SMC1BQ8NDV3 RNU6-661P-201ENST00000362409 107 ntBASIC2.55□□□□□ -2
SMC1BQ8NDV3 RNU7-94P-201ENST00000459576 63 ntBASIC2.55□□□□□ -2
SMC1BQ8NDV3 RPL23AP54-201ENST00000495129 419 ntBASIC2.55□□□□□ -2
SMC1BQ8NDV3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.55□□□□□ -2
SMC1BQ8NDV3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.55□□□□□ -2
SMC1BQ8NDV3 Y_RNA.802-201ENST00000614892 130 ntBASIC2.55□□□□□ -2
SMC1BQ8NDV3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMC1BQ8NDV3 RNU6-1020P-201ENST00000363684 107 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 RNA5SP190-201ENST00000365222 118 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 SNORA72-201ENST00000384339 132 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 SNORA8.3-201ENST00000384679 139 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 MIR562-201ENST00000384894 95 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 MIR597-201ENST00000384968 97 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 MIR613-201ENST00000385248 95 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 SNORA36B-201ENST00000410438 131 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 AC069114.2-201ENST00000604699 304 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.54□□□□□ -2
SMC1BQ8NDV3 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
SMC1BQ8NDV3 MIR367-201ENST00000362299 68 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 RNU6-653P-201ENST00000363074 106 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 RNU4-17P-201ENST00000365598 141 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 RPS4XP11-201ENST00000446897 772 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.53□□□□□ -2
SMC1BQ8NDV3 RPL23AP63-201ENST00000498752 471 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.53□□□□□ -2
SMC1BQ8NDV3 RNU7-128P-201ENST00000517247 62 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.53□□□□□ -2
SMC1BQ8NDV3 AC100767.1-201ENST00000528178 123 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 AC121758.2-201ENST00000553271 193 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 MIR4724-201ENST00000579485 89 ntBASIC2.53□□□□□ -2
SMC1BQ8NDV3 AC018630.2-201ENST00000534866 2403 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 SNORA3A-201ENST00000364113 130 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 RNU6-923P-201ENST00000364753 107 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 MIR526A2-201ENST00000390198 65 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 MIR1283-2-201ENST00000408621 87 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 RNU4-62P-201ENST00000410125 130 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 RNU2-64P-201ENST00000411315 191 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 AC099677.2-201ENST00000436385 175 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 SNORD13-201ENST00000459299 104 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 RNU6-1096P-201ENST00000517089 102 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 AP002392.1-201ENST00000537692 208 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 CBX3P4-201ENST00000538909 354 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 MIR4529-201ENST00000578110 78 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 MIR5688-201ENST00000580619 83 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 AC009831.4-201ENST00000620744 325 ntBASIC2.52□□□□□ -2.01
SMC1BQ8NDV3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 SNORA33-201ENST00000363664 130 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 MIR524-201ENST00000385242 87 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 RNU6-493P-201ENST00000391321 108 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 RNU6-437P-201ENST00000459408 95 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 RPS26P45-201ENST00000471748 340 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 AL163195.1-201ENST00000496941 348 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 MIR5694-201ENST00000581190 76 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 BX248123.2-201ENST00000606318 124 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 AC004792.1-201ENST00000614523 137 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 MIR6079-201ENST00000635807 62 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 U6.108-201ENST00000637764 58 ntBASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.51□□□□□ -2.01
SMC1BQ8NDV3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 MIR1276-201ENST00000408707 83 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 PIGPP3-201ENST00000425307 415 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 AC069257.2-201ENST00000441819 155 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 AC091021.1-201ENST00000468051 388 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 RNY3P16-201ENST00000516338 101 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 AC011604.1-201ENST00000545978 196 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 MIR3683-201ENST00000580847 82 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 AC098479.1-201ENST00000609225 154 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 MIR6504-201ENST00000613520 61 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 AC022513.1-201ENST00000624512 117 ntBASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SMC1BQ8NDV3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 MIR626-201ENST00000385032 94 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 AC233266.1-201ENST00000454518 96 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 RNU7-193P-201ENST00000516723 65 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 RNU6-341P-201ENST00000516973 96 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 MIR5094-201ENST00000578766 85 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 AC078899.2-201ENST00000595282 212 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 AC242852.1-201ENST00000612151 96 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 AC244015.1-201ENST00000622301 99 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 AC100821.1-201ENST00000523153 2479 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 AC005336.3-201ENST00000623833 2679 ntBASIC2.49□□□□□ -2.01
SMC1BQ8NDV3 RNU6-674P-201ENST00000363831 107 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms