Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SNORA63.7-201ENST00000365579 123 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 RNU6-474P-201ENST00000384243 107 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.460-201ENST00000384255 102 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 U8.19-201ENST00000459095 133 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 HMGN1P7-201ENST00000491722 313 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 SNORA31.2-201ENST00000516019 134 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 RNU7-116P-201ENST00000516940 62 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 AL022345.2-201ENST00000606307 135 ntBASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.61-201ENST00000362835 102 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.424-201ENST00000384063 103 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 SNORA25-201ENST00000384384 134 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.535-201ENST00000384612 99 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 MIR452-201ENST00000385020 85 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 AC024067.1-201ENST00000426199 223 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 AC245047.7-201ENST00000440265 293 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 RNU6-1046P-201ENST00000516538 107 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 FAM106DP-201ENST00000586416 501 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 POLR3GP1-201ENST00000594073 261 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 AP003357.1-201ENST00000604497 148 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 SNORD113-5-201ENST00000607261 78 ntBASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.28-201ENST00000362554 111 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.222-201ENST00000364264 102 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 RNA5SP126-201ENST00000365092 109 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 MIR1298-201ENST00000408783 112 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.631-201ENST00000459607 101 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 SNORD111.1-201ENST00000516421 86 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 RNU7-115P-201ENST00000516433 55 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.715-201ENST00000517082 110 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 RNA5SP404-201ENST00000517118 132 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 AC024405.2-202ENST00000532731 184 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 AC104695.3-201ENST00000604052 296 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 AC124312.5-201ENST00000604451 268 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 RAC1P9-201ENST00000604990 392 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 BX284668.6-201ENST00000606899 438 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 AC090574.1-201ENST00000623186 233 ntBASIC1.05□□□□□ -2.24
CCDC197Q8NCU1 AC117470.1-201ENST00000381974 330 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SNORA70.7-201ENST00000384159 133 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SNORA67.5-201ENST00000391036 107 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 RNU6-823P-201ENST00000391042 103 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SNRPGP10-201ENST00000432323 225 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 POLR2KP2-201ENST00000438155 177 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SNORD13-201ENST00000459299 104 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 snoU13.26-201ENST00000459452 105 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SEPT14P8-201ENST00000508026 178 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 RPL23AP94-201ENST00000512518 302 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SNORA31.4-201ENST00000516049 129 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 RNU6-947P-201ENST00000516264 106 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SNORD45.4-201ENST00000516629 73 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 AC127455.1-201ENST00000565496 145 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 MIR4300-201ENST00000581016 96 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 AL096861.1-201ENST00000610899 123 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 MIR376A1-201ENST00000616574 68 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 MIR548AY-201ENST00000617669 107 ntBASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC197Q8NCU1 RNU4-80P-201ENST00000363200 141 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 RNU6-450P-201ENST00000364654 107 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 U8.7-201ENST00000364940 136 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 SNORD50B-201ENST00000364995 70 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 RNU6-969P-201ENST00000383900 105 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 RNU6-131P-201ENST00000391144 107 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 MLLT10P1-201ENST00000418346 262 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 RPL39P39-201ENST00000455840 151 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 RPS23P4-201ENST00000487908 423 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 AC117454.1-201ENST00000491120 168 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 RNU6-397P-201ENST00000516226 104 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 HSPE1P19-201ENST00000603327 295 ntBASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC197Q8NCU1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 AL442644.1-201ENST00000454390 3105 ntBASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 Y_RNA.128-201ENST00000363391 112 ntBASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 Y_RNA.138-201ENST00000363462 102 ntBASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 SNORD113-8-201ENST00000363497 74 ntBASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 RNU1-124P-201ENST00000363861 145 ntBASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
CCDC197Q8NCU1 RNU6-102P-201ENST00000384485 104 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms