Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNA5SP323-201ENST00000391094 133 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 RNU6-381P-201ENST00000391259 108 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 AL356320.1-201ENST00000429616 163 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 RPS4XP11-201ENST00000446897 772 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 AC055731.1-201ENST00000474387 401 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 RNU7-128P-201ENST00000517247 62 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 RNU2-19P-201ENST00000517288 84 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 MIR5089-201ENST00000580047 84 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 MIR5688-201ENST00000580619 83 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 U6.106-201ENST00000636360 105 ntBASIC1.86□□□□□ -2.11
CLIP4Q8N3C7 AP006437.1-201ENST00000641440 3685 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 SNORA33-201ENST00000363664 130 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.182-201ENST00000363880 111 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 MIR597-201ENST00000384968 97 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 RNA5SP450-201ENST00000411206 102 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 AC099677.2-201ENST00000436385 175 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 RNU6-437P-201ENST00000459408 95 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 RN7SKP164-201ENST00000516138 266 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 RNU6-453P-201ENST00000516819 85 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 MRPS18CP4-201ENST00000535821 231 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 AC091544.4-201ENST00000555268 342 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 MIR4529-201ENST00000578110 78 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 U6.108-201ENST00000637764 58 ntBASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.121-201ENST00000363309 113 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.240-201ENST00000364469 95 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 RNU11-3P-201ENST00000391111 133 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 SNORA3.2-201ENST00000408221 125 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 CST2P1-201ENST00000425770 87 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AC245047.8-201ENST00000456455 284 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AC091021.1-201ENST00000468051 388 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 TRBV12-1-201ENST00000479785 344 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AL163195.1-201ENST00000496941 348 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 SCARNA8-201ENST00000515924 131 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 Y_RNA.797-201ENST00000515977 94 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 RNU6-1096P-201ENST00000517089 102 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AC011604.1-201ENST00000545978 196 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 MIR1273D-201ENST00000577266 86 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AL929325.1-201ENST00000603096 117 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AL590808.1-201ENST00000618696 141 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 AC022513.1-201ENST00000624512 117 ntBASIC1.84□□□□□ -2.11
CLIP4Q8N3C7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CLIP4Q8N3C7 RNU6-674P-201ENST00000363831 107 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.229-201ENST00000364347 113 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 MIR520G-201ENST00000385064 90 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 MT-TT-201ENST00000387460 66 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 RNA5SP465-201ENST00000391195 109 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 RNU11-5P-201ENST00000391216 129 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 MIR1278-201ENST00000408753 81 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 RNA5SP489-201ENST00000410986 109 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 HMGN2P3-201ENST00000433603 273 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 HMGN2P5-201ENST00000436882 273 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 AC233266.1-201ENST00000454518 96 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 RNA5SP233-201ENST00000459153 113 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 MIR4744-201ENST00000581563 82 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 AC091178.2-201ENST00000584401 117 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 AC242852.1-201ENST00000612151 96 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 AC244015.1-201ENST00000622301 99 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 MIR219B-201ENST00000637023 88 ntBASIC1.83□□□□□ -2.12
CLIP4Q8N3C7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 RNU6-103P-201ENST00000363686 107 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 RNU4-41P-201ENST00000364426 143 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.464-201ENST00000384282 110 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 MIR515-2-201ENST00000384883 83 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 MIR515-1-201ENST00000384884 83 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 MIR616-201ENST00000385293 97 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 RN7SKP223-201ENST00000410582 62 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 RNU6-1007P-201ENST00000516586 107 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 AC024995.1-201ENST00000523014 93 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 AC005786.1-201ENST00000588553 154 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 MIR6079-201ENST00000635807 62 ntBASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CLIP4Q8N3C7 AC018630.2-201ENST00000534866 2403 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.75-201ENST00000362927 97 ntBASIC1.81□□□□□ -2.12
CLIP4Q8N3C7 Y_RNA.203-201ENST00000364106 102 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms