Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MTND4LP26-201ENST00000518144 282 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 AC133485.1-201ENST00000567176 124 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 AC138907.6-201ENST00000568401 126 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.71□□□□□ -2.3
CCDC65Q8IXS2 RNU6-708P-201ENST00000384217 107 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 Y_RNA.621-201ENST00000411065 96 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 RPS3AP1-201ENST00000413190 320 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 CHEK2P4-201ENST00000450340 246 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 RPS20P10-201ENST00000451209 253 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 RNU6-470P-201ENST00000515954 104 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 RN7SKP164-201ENST00000516138 266 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 MIR4452-201ENST00000583004 71 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 AC005176.2-201ENST00000596933 147 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 AC011476.5-201ENST00000615594 130 ntBASIC0.7□□□□□ -2.3
CCDC65Q8IXS2 Y_RNA.146-201ENST00000363549 102 ntBASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 RNU6-1335P-201ENST00000365426 107 ntBASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 RNU7-169P-201ENST00000459456 61 ntBASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 SNORD45.4-201ENST00000516629 73 ntBASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 AC004812.1-201ENST00000540773 146 ntBASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 AC131055.1-201ENST00000584626 316 ntBASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 AC006380.1-201ENST00000603598 186 ntBASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 RBM11P1-201ENST00000604951 799 ntBASIC0.69□□□□□ -2.3
CCDC65Q8IXS2 SNORA25.3-201ENST00000363205 127 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 Y_RNA.248-201ENST00000364501 109 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 SNORD50B-201ENST00000364995 70 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 MIR559-201ENST00000385188 96 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 SNRPGP10-201ENST00000432323 225 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 RNU6-264P-201ENST00000517134 104 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 MIR4659A-201ENST00000580269 81 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 MIR5690-201ENST00000583739 73 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 AC005972.2-201ENST00000604690 348 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 AC022441.3-201ENST00000605737 136 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 SEPT14P17-201ENST00000617978 177 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 AC139792.2-201ENST00000624218 587 ntBASIC0.68□□□□□ -2.3
CCDC65Q8IXS2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 MIR136-201ENST00000385207 82 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 MIR1302-7-201ENST00000408841 72 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 MTND1P2-201ENST00000430604 821 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 RNU6-155P-201ENST00000516347 100 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 RNU7-4P-201ENST00000516961 62 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 AC022616.4-201ENST00000522985 181 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 AC109810.1-201ENST00000534066 224 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 MIR4764-201ENST00000580680 88 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 AC092794.1-201ENST00000612734 582 ntBASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC65Q8IXS2 MIR103A2-201ENST00000362154 78 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 SNORA72-201ENST00000384339 132 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 RNU6-1297P-201ENST00000384415 104 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 MIR520C-201ENST00000385005 87 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 SNORD78.2-201ENST00000391076 69 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 RNU6-876P-201ENST00000391295 104 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 AL390729.2-201ENST00000416137 156 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 SNORA18.7-201ENST00000516910 131 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 AC144568.1-201ENST00000520139 137 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 AC023827.1-201ENST00000569247 97 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 uc_338.17-201ENST00000619633 179 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 U6.92-201ENST00000636464 89 ntBASIC0.66□□□□□ -2.3
CCDC65Q8IXS2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.230-201ENST00000364348 109 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 MLLT10P1-201ENST00000418346 262 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 MTCO2P27-201ENST00000420740 428 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 AL392103.1-201ENST00000447000 198 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 SNORD123-201ENST00000459473 70 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 RNU6-911P-201ENST00000516523 104 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 MIR4423-201ENST00000580922 80 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 U2.1-201ENST00000618978 145 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 AC023934.1-201ENST00000574529 2389 ntBASIC0.65□□□□□ -2.31
CCDC65Q8IXS2 RNU6-324P-201ENST00000363957 106 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.310-201ENST00000365063 113 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.329-201ENST00000365209 107 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.330-201ENST00000365230 109 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 SNORD116-29-201ENST00000384516 83 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.570-201ENST00000384750 101 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 MIR499A-201ENST00000384903 122 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 MCFD2P1-201ENST00000417812 300 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 AC096644.2-201ENST00000429278 159 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 FABP5P4-201ENST00000437203 171 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 AC113410.1-201ENST00000505029 247 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 AC036111.3-201ENST00000526389 112 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 MIR6788-201ENST00000618842 66 ntBASIC0.64□□□□□ -2.31
CCDC65Q8IXS2 RNU6-1084P-201ENST00000362498 107 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 Y_RNA.27-201ENST00000362540 103 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 SNORD81.1-201ENST00000363064 77 ntBASIC0.63□□□□□ -2.31
CCDC65Q8IXS2 SNORD14.1-201ENST00000365609 90 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms