Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 RNA5SP247-201ENST00000411181 105 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 AC245517.4-201ENST00000448601 281 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 RNA5SP168-201ENST00000516642 112 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 Y_RNA.701-201ENST00000516812 110 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 RNU6-902P-201ENST00000517212 91 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 RAC1P9-201ENST00000604990 392 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 AL513423.1-201ENST00000621695 132 ntBASIC1.34□□□□□ -2.19
CCDC60Q8IWA6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.2
CCDC60Q8IWA6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 SNORA63.7-201ENST00000365579 123 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 SNORD63-201ENST00000384262 68 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.527-201ENST00000384573 102 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 U8.16-201ENST00000391279 133 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 AL590004.1-201ENST00000405321 300 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.602-201ENST00000410535 92 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 AC010655.3-201ENST00000478818 450 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 OR9P1P-201ENST00000496431 281 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 RNU7-28P-201ENST00000516759 62 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 RNU6-1153P-201ENST00000516760 105 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.721-201ENST00000517207 102 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 AC020661.2-201ENST00000560114 134 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 AL356055.1-201ENST00000602528 446 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 MIR376A1-201ENST00000616574 68 ntBASIC1.33□□□□□ -2.2
CCDC60Q8IWA6 SNORD33-201ENST00000362761 85 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 RNU4-41P-201ENST00000364426 143 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.286-201ENST00000364813 102 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 MIR660-201ENST00000385235 97 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 RNA5SP482-201ENST00000391269 118 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 MIR1276-201ENST00000408707 83 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 MIR1252-201ENST00000408861 65 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 RNU6-710P-201ENST00000410424 105 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 RPS27P16-201ENST00000425758 201 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 AC024067.1-201ENST00000426199 223 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 POLR2KP2-201ENST00000438155 177 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 RPS20P10-201ENST00000451209 253 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 RNU6-897P-201ENST00000517135 105 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 AC011604.1-201ENST00000545978 196 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 AC068647.2-201ENST00000637380 353 ntBASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.32□□□□□ -2.2
CCDC60Q8IWA6 SNORD68-201ENST00000363214 84 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 SNORD113-8-201ENST00000363497 74 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.341-201ENST00000365341 102 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.383-201ENST00000383855 97 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 RNU6-424P-201ENST00000384367 105 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 SNX2P2-201ENST00000424553 323 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 AC093850.1-201ENST00000454121 251 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 SEPT14P8-201ENST00000508026 178 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 RNA5SP102-201ENST00000516865 106 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 MIR4300-201ENST00000581016 96 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 AC005972.2-201ENST00000604690 348 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 SNORD113-5-201ENST00000607261 78 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.31□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.11-201ENST00000362375 109 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.158-201ENST00000363651 101 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.183-201ENST00000363882 113 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 RNU4-76P-201ENST00000364509 141 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 Z98949.2-201ENST00000440996 144 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 AC092991.1-201ENST00000477176 376 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 RNU7-12P-201ENST00000516030 62 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 SNORA40.15-201ENST00000516884 107 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 AL358944.1-201ENST00000528537 144 ntBASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC60Q8IWA6 RNU4-80P-201ENST00000363200 141 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.202-201ENST00000364083 110 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.455-201ENST00000384230 98 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 RNU6-102P-201ENST00000384485 104 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 AC015922.2-201ENST00000435593 184 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 COX6CP14-201ENST00000469580 174 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 MIR4680-201ENST00000580906 66 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 AC044792.1-201ENST00000593294 196 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 AL078604.3-201ENST00000615580 211 ntBASIC1.29□□□□□ -2.2
CCDC60Q8IWA6 Y_RNA.210-201ENST00000364161 110 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 SNORA25.9-201ENST00000365087 128 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 AC117470.1-201ENST00000381974 330 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 MLLT10P1-201ENST00000418346 262 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 PIGPP3-201ENST00000425307 415 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 RNU6-922P-201ENST00000516753 99 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 AC131281.1-201ENST00000522984 164 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 AL591926.4-201ENST00000616895 298 ntBASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CCDC60Q8IWA6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC60Q8IWA6 MIRLET7C-201ENST00000362160 84 ntBASIC1.27□□□□□ -2.21
CCDC60Q8IWA6 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms