Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 Y_RNA.599-201ENST00000410489 109 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 FCF1P4-201ENST00000448326 183 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 MTCO3P10-201ENST00000455912 772 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 RNU6-155P-201ENST00000516347 100 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 RNU6-264P-201ENST00000517134 104 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 AC109810.1-201ENST00000534066 224 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 MIR4764-201ENST00000580680 88 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 AC005176.2-201ENST00000596933 147 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 AL353765.1-201ENST00000605514 183 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 SEPT14P17-201ENST00000617978 177 ntBASIC0.67□□□□□ -2.3
CCDC50Q8IVM0 RNU6-1084P-201ENST00000362498 107 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 Y_RNA.164-201ENST00000363709 102 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 AC117470.1-201ENST00000381974 330 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 AC096644.2-201ENST00000429278 159 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 SNRPGP10-201ENST00000432323 225 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 Y_RNA.635-201ENST00000459041 101 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 RPS29P1-201ENST00000465274 159 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 RN7SKP164-201ENST00000516138 266 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.66□□□□□ -2.3
CCDC50Q8IVM0 SNORD81.2-201ENST00000365153 76 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 SNORD14.1-201ENST00000365609 90 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 RNY3P4-201ENST00000384428 101 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 SNORD89-201ENST00000390981 114 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 CHEK2P4-201ENST00000450340 246 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 MIR4659A-201ENST00000580269 81 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 AC136443.5-201ENST00000603741 370 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 RNU6-94P-201ENST00000607728 107 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 TPTEP1-208ENST00000636884 213 ntBASIC0.65□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.146-201ENST00000363549 102 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.605-201ENST00000410577 105 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 MTCO2P27-201ENST00000420740 428 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 FABP5P4-201ENST00000437203 171 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 FGF7P6-202ENST00000451282 293 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 SNORD123-201ENST00000459473 70 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 RNU6-470P-201ENST00000515954 104 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 AP003484.1-201ENST00000530974 250 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 AC133485.1-201ENST00000567176 124 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 AC138907.6-201ENST00000568401 126 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 AC005972.2-201ENST00000604690 348 ntBASIC0.64□□□□□ -2.31
CCDC50Q8IVM0 RNU6-654P-201ENST00000364373 107 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.329-201ENST00000365209 107 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 MT-TL1-201ENST00000386347 75 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 RNU6-876P-201ENST00000391295 104 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 MIR1276-201ENST00000408707 83 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 CYP3A137P-201ENST00000562436 69 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 AC104465.1-201ENST00000611365 139 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 7SK.10-201ENST00000621414 298 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 AC138305.3-201ENST00000624988 240 ntBASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.166-201ENST00000363730 102 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.314-201ENST00000365114 102 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.368-201ENST00000365547 113 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 SNORD78.2-201ENST00000391076 69 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 MIR1302-7-201ENST00000408841 72 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 PRDX4P1-201ENST00000507189 574 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 MTND4LP26-201ENST00000518144 282 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 AC144568.1-201ENST00000520139 137 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 AC036111.3-201ENST00000526389 112 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 MIR5690-201ENST00000583739 73 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 U2.1-201ENST00000618978 145 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 uc_338.17-201ENST00000619633 179 ntBASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
CCDC50Q8IVM0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.148-201ENST00000363557 117 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 snoU2-30.1-201ENST00000365012 70 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 SNORA72-201ENST00000384339 132 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.474-201ENST00000384341 102 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 SNORD28B-201ENST00000390993 75 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 RNU6-131P-201ENST00000391144 107 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 RNA5SP95-201ENST00000410319 137 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 RNU7-4P-201ENST00000516961 62 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 MIR8070-201ENST00000616510 88 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 AC022306.2-201ENST00000617563 647 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 U6.92-201ENST00000636464 89 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 AC134026.1-201ENST00000623249 2239 ntBASIC0.61□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.4-201ENST00000362333 112 ntBASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 RNU6-855P-201ENST00000410395 104 ntBASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 RNU7-43P-201ENST00000516554 64 ntBASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 AC022616.4-201ENST00000522985 181 ntBASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 MIR548AR-201ENST00000582191 57 ntBASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 AC022441.3-201ENST00000605737 136 ntBASIC0.6□□□□□ -2.31
CCDC50Q8IVM0 Y_RNA.248-201ENST00000364501 109 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 MIR570-201ENST00000384917 97 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 MIR559-201ENST00000385188 96 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 AL590004.1-201ENST00000405321 300 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 MCFD2P1-201ENST00000417812 300 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 MTND1P2-201ENST00000430604 821 ntBASIC0.59□□□□□ -2.31
CCDC50Q8IVM0 U7.7-201ENST00000459276 60 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms