Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SNORD114-22-201ENST00000365423 72 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-20P-201ENST00000384106 107 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.446-201ENST00000384178 104 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 RNY3P4-201ENST00000384428 101 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-1304P-201ENST00000411374 106 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 PDCL2P1-201ENST00000419302 352 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 CHEK2P4-201ENST00000450340 246 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-155P-201ENST00000516347 100 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-1012P-201ENST00000516606 109 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 AC022616.4-201ENST00000522985 181 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 AC109810.1-201ENST00000534066 224 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 MIR4764-201ENST00000580680 88 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 AC011476.5-201ENST00000615594 130 ntBASIC0.63□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-626P-201ENST00000363354 107 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.160-201ENST00000363677 92 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.191-201ENST00000363972 113 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.279-201ENST00000364763 95 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-890P-201ENST00000384121 107 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 SNORD78.2-201ENST00000391076 69 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 FGF7P6-202ENST00000451282 293 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 RN7SKP164-201ENST00000516138 266 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-436P-201ENST00000516171 114 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 RNU7-4P-201ENST00000516961 62 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 AC104465.1-201ENST00000611365 139 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 MIR6504-201ENST00000613520 61 ntBASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.62□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.166-201ENST00000363730 102 ntBASIC0.61□□□□□ -2.31
NUDCD3Q8IVD9 MIR520E-201ENST00000384867 87 ntBASIC0.61□□□□□ -2.31
NUDCD3Q8IVD9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.61□□□□□ -2.31
NUDCD3Q8IVD9 AC144568.1-201ENST00000520139 137 ntBASIC0.61□□□□□ -2.31
NUDCD3Q8IVD9 AC005972.2-201ENST00000604690 348 ntBASIC0.61□□□□□ -2.31
NUDCD3Q8IVD9 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
NUDCD3Q8IVD9 TPTEP1-208ENST00000636884 213 ntBASIC0.61□□□□□ -2.31
NUDCD3Q8IVD9 SNORD50B-201ENST00000364995 70 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 snoU2-30.1-201ENST00000365012 70 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 SNORA72-201ENST00000384339 132 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 MIR15B-201ENST00000385045 98 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-131P-201ENST00000391144 107 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.599-201ENST00000410489 109 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.605-201ENST00000410577 105 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 SNORD123-201ENST00000459473 70 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 RPS29P1-201ENST00000465274 159 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 PRDX4P1-201ENST00000507189 574 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 RNU7-43P-201ENST00000516554 64 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 MTND4LP26-201ENST00000518144 282 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 AC133485.1-201ENST00000567176 124 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 AC138907.6-201ENST00000568401 126 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 MIR4659A-201ENST00000580269 81 ntBASIC0.6□□□□□ -2.31
NUDCD3Q8IVD9 Y_RNA.146-201ENST00000363549 102 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 RNA5SP48-201ENST00000363969 126 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 SNORD89-201ENST00000390981 114 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 SNRPGP10-201ENST00000432323 225 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 COX6CP6-201ENST00000490840 228 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-470P-201ENST00000515954 104 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 MIR4452-201ENST00000583004 71 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 MIR5690-201ENST00000583739 73 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 RNU6-94P-201ENST00000607728 107 ntBASIC0.59□□□□□ -2.31
NUDCD3Q8IVD9 AC068700.1-201ENST00000565862 3754 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 SNORD81.2-201ENST00000365153 76 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 HMGN2P32-201ENST00000444648 269 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 MTCO3P10-201ENST00000455912 772 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 U7.7-201ENST00000459276 60 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 AC113410.1-201ENST00000505029 247 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 CYP3A137P-201ENST00000562436 69 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 U2.1-201ENST00000618978 145 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 7SK.10-201ENST00000621414 298 ntBASIC0.58□□□□□ -2.32
NUDCD3Q8IVD9 Y_RNA.314-201ENST00000365114 102 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 Y_RNA.329-201ENST00000365209 107 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 RNU6-708P-201ENST00000384217 107 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 MT-TL1-201ENST00000386347 75 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 RNU6-192P-201ENST00000391253 100 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 RNU6-876P-201ENST00000391295 104 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 SNORD99-201ENST00000408612 74 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 MTND1P2-201ENST00000430604 821 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 AC022441.3-201ENST00000605737 136 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 U6.92-201ENST00000636464 89 ntBASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
NUDCD3Q8IVD9 AC134026.1-201ENST00000623249 2239 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 Y_RNA.230-201ENST00000364348 109 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 Y_RNA.368-201ENST00000365547 113 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 MIR628-201ENST00000385229 95 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 RNU6-855P-201ENST00000410395 104 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 MCFD2P1-201ENST00000417812 300 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 AC096644.2-201ENST00000429278 159 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 U8.19-201ENST00000459095 133 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 AC036111.3-201ENST00000526389 112 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 AC025627.3-201ENST00000582078 182 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.56□□□□□ -2.32
NUDCD3Q8IVD9 AC138305.3-201ENST00000624988 240 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms