Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 RNA5SP100-201ENST00000410903 110 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RNA5SP59-201ENST00000410922 110 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RNU2-64P-201ENST00000411315 191 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 AL356320.1-201ENST00000429616 163 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RNA5SP57-201ENST00000459463 123 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RPL23AP63-201ENST00000498752 471 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 MIR4308-201ENST00000580634 81 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 SNORA28-201ENST00000606769 126 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 AC004792.1-201ENST00000614523 137 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
LRRTM3Q86VH5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 RNA5SP276-201ENST00000362580 94 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 RNU6-103P-201ENST00000363686 107 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.253-201ENST00000364562 112 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 RNU6-47P-201ENST00000383866 107 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.435-201ENST00000384095 112 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 RNU4-70P-201ENST00000384579 139 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 MIR221-201ENST00000385135 110 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 RNA5SP212-201ENST00000391223 107 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 RNA5SP482-201ENST00000391269 118 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 AL158823.1-201ENST00000418441 478 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.714-201ENST00000517065 90 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 RPL23AP91-201ENST00000569211 455 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 MIR1273D-201ENST00000577266 86 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 AC072026.1-201ENST00000605023 201 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.121-201ENST00000363309 113 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.229-201ENST00000364347 113 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.238-201ENST00000364441 102 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.571-201ENST00000384753 98 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.572-201ENST00000384757 98 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 MIR616-201ENST00000385293 97 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 RN7SKP101-201ENST00000411376 320 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 RNU7-120P-201ENST00000459334 63 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 RNU6-1007P-201ENST00000516586 107 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 RNA5SP437-201ENST00000517249 129 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 MIR4287-201ENST00000579398 78 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 AL391903.3-201ENST00000612158 163 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
LRRTM3Q86VH5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 RNU6-1209P-201ENST00000363655 107 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.796-201ENST00000364268 102 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 snoU2_19.4-201ENST00000364329 80 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 SNORA16B-201ENST00000364674 135 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.799-201ENST00000364992 102 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 AL034345.1-201ENST00000407768 123 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 MIR1278-201ENST00000408753 81 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 RN7SKP192-201ENST00000411291 327 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 PIGPP3-201ENST00000425307 415 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 SNRPGP10-201ENST00000432323 225 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 STAG3L5P-204ENST00000443759 179 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 AC098479.1-201ENST00000609225 154 ntBASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.38□□□□□ -2.03
LRRTM3Q86VH5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 MIR126-201ENST00000362291 85 ntBASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 Y_RNA.233-201ENST00000364407 101 ntBASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 RNU2-2P-201ENST00000410396 191 ntBASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 AC245047.8-201ENST00000456455 284 ntBASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 SNORA31.10-201ENST00000516482 106 ntBASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 RNU2-4P-201ENST00000606190 192 ntBASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 AL591926.4-201ENST00000616895 298 ntBASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.37□□□□□ -2.03
LRRTM3Q86VH5 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 SNORD68-201ENST00000363214 84 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 RNY3P5-201ENST00000384127 102 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 RNU6-1228P-201ENST00000391014 107 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 HSPE1P9-201ENST00000440046 311 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 snoU13.27-201ENST00000459278 104 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 AC107393.1-201ENST00000512403 346 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 SNORA31.17-201ENST00000516953 127 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 MIR4709-201ENST00000577272 72 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 MIR4744-201ENST00000581563 82 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 AL021707.8-201ENST00000609428 183 ntBASIC2.36□□□□□ -2.03
LRRTM3Q86VH5 SNORA4.2-201ENST00000365313 147 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 290.7 ms