Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC027279.3-201ENST00000625055 122 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 AL606534.2-204ENST00000635008 178 ntBASIC1.26□□□□□ -2.21
PRPF39Q86UA1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.172-201ENST00000363765 102 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 RNU1-115P-201ENST00000365329 160 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 MIR452-201ENST00000385020 85 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 MTND1P14-201ENST00000427400 950 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 RNU6-966P-201ENST00000516479 104 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 SNORA40.14-201ENST00000516543 86 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 RNU4-77P-201ENST00000516692 156 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 AL121655.1-201ENST00000605811 308 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 AC011373.1-201ENST00000607270 237 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 AC006157.1-201ENST00000611750 366 ntBASIC1.25□□□□□ -2.21
PRPF39Q86UA1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PRPF39Q86UA1 RNU4-73P-201ENST00000363164 141 ntBASIC1.24□□□□□ -2.21
PRPF39Q86UA1 RNY3P14-201ENST00000384309 102 ntBASIC1.24□□□□□ -2.21
PRPF39Q86UA1 RPS20P10-201ENST00000451209 253 ntBASIC1.24□□□□□ -2.21
PRPF39Q86UA1 U8.19-201ENST00000459095 133 ntBASIC1.24□□□□□ -2.21
PRPF39Q86UA1 RNA5SP102-201ENST00000516865 106 ntBASIC1.24□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.714-201ENST00000517065 90 ntBASIC1.24□□□□□ -2.21
PRPF39Q86UA1 AC010205.1-201ENST00000616668 449 ntBASIC1.24□□□□□ -2.21
PRPF39Q86UA1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.24□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.341-201ENST00000365341 102 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.439-201ENST00000384119 94 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.462-201ENST00000384268 102 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 SNORA72-201ENST00000384339 132 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 RNU6-21P-201ENST00000384710 107 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.579-201ENST00000390939 94 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.23□□□□□ -2.21
PRPF39Q86UA1 SNORD111.1-201ENST00000516421 86 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.713-201ENST00000517013 96 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 AC091925.1-201ENST00000623204 462 ntBASIC1.23□□□□□ -2.21
PRPF39Q86UA1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
PRPF39Q86UA1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 RNU4-79P-201ENST00000362764 141 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.253-201ENST00000364562 112 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.458-201ENST00000384240 102 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 MIR526A1-201ENST00000384897 85 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 AF228730.4-201ENST00000421457 183 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 AC245047.7-201ENST00000440265 293 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 U8.20-201ENST00000459445 131 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 AC027335.2-201ENST00000624030 375 ntBASIC1.22□□□□□ -2.21
PRPF39Q86UA1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 RNU4-50P-201ENST00000364361 141 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 U8.5-201ENST00000364528 136 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.269-201ENST00000364685 89 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.315-201ENST00000365117 102 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 MIR518E-201ENST00000385252 88 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 RNU6-131P-201ENST00000391144 107 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.21□□□□□ -2.22
PRPF39Q86UA1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.21□□□□□ -2.22
PRPF39Q86UA1 RNU6-1170P-201ENST00000515974 106 ntBASIC1.21□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.116-201ENST00000363292 103 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 SNORA70.7-201ENST00000384159 133 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.471-201ENST00000384312 102 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 MIR1285-1-201ENST00000408593 84 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 MIR1298-201ENST00000408783 112 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 AC022028.1-201ENST00000412054 408 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 COX6CP14-201ENST00000469580 174 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 SNORA25.10-201ENST00000515926 124 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 MIR4423-201ENST00000580922 80 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 DEFB117-201ENST00000602356 141 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 SNORD58B-201ENST00000607313 66 ntBASIC1.2□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.143-201ENST00000363520 106 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.197-201ENST00000364004 102 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 snoU2-30.1-201ENST00000365012 70 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 RNU6-937P-201ENST00000384325 106 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 RNY1P14-201ENST00000384426 108 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 MIR516B2-201ENST00000385190 85 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 SNRPGP10-201ENST00000432323 225 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 AC093852.1-201ENST00000503587 266 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 SNORD45.4-201ENST00000516629 73 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 RNU7-116P-201ENST00000516940 62 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 MIR4762-201ENST00000585261 75 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 POLR3GP1-201ENST00000594073 261 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 AC136443.5-201ENST00000603741 370 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 AL008636.1-201ENST00000625038 1018 ntBASIC1.19□□□□□ -2.22
PRPF39Q86UA1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
PRPF39Q86UA1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PRPF39Q86UA1 SNORD14.1-201ENST00000365609 90 ntBASIC1.18□□□□□ -2.22
PRPF39Q86UA1 Y_RNA.424-201ENST00000384063 103 ntBASIC1.18□□□□□ -2.22
PRPF39Q86UA1 MIR522-201ENST00000385071 87 ntBASIC1.18□□□□□ -2.22
PRPF39Q86UA1 MIR136-201ENST00000385207 82 ntBASIC1.18□□□□□ -2.22
PRPF39Q86UA1 RNU4-30P-201ENST00000410245 143 ntBASIC1.18□□□□□ -2.22
PRPF39Q86UA1 AL117351.2-201ENST00000513571 157 ntBASIC1.18□□□□□ -2.22
PRPF39Q86UA1 AC040926.1-201ENST00000530195 238 ntBASIC1.18□□□□□ -2.22
PRPF39Q86UA1 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
PRPF39Q86UA1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms