Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AP000942.3-201ENST00000603702 160 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 AC068647.2-201ENST00000637380 353 ntBASIC1.43□□□□□ -2.18
LDB1Q86U70 MIRLET7C-201ENST00000362160 84 ntBASIC1.42□□□□□ -2.18
LDB1Q86U70 RNU6-639P-201ENST00000384074 107 ntBASIC1.42□□□□□ -2.18
LDB1Q86U70 AL590004.1-201ENST00000405321 300 ntBASIC1.42□□□□□ -2.18
LDB1Q86U70 Y_RNA.602-201ENST00000410535 92 ntBASIC1.42□□□□□ -2.18
LDB1Q86U70 AC108667.1-201ENST00000428618 249 ntBASIC1.42□□□□□ -2.18
LDB1Q86U70 RNU6-496P-201ENST00000516145 99 ntBASIC1.42□□□□□ -2.18
LDB1Q86U70 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
LDB1Q86U70 DNAJC19P9-201ENST00000555084 351 ntBASIC1.42□□□□□ -2.18
LDB1Q86U70 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.42□□□□□ -2.18
LDB1Q86U70 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
LDB1Q86U70 RNU6-199P-201ENST00000362954 107 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 SNORD68-201ENST00000363214 84 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 RNU6-770P-201ENST00000363929 105 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 HSPE1P25-201ENST00000455484 251 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 RPL39P38-201ENST00000467018 153 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 RNU6-1143P-201ENST00000516125 104 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 RNU6-764P-201ENST00000516396 105 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.41□□□□□ -2.18
LDB1Q86U70 POLR3GP1-201ENST00000594073 261 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 AP001485.1-201ENST00000604799 199 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 AL078604.3-201ENST00000615580 211 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 AL591926.4-201ENST00000616895 298 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 AC106754.2-201ENST00000623006 233 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
LDB1Q86U70 RNU4-80P-201ENST00000363200 141 ntBASIC1.4□□□□□ -2.19
LDB1Q86U70 Y_RNA.210-201ENST00000364161 110 ntBASIC1.4□□□□□ -2.19
LDB1Q86U70 Y_RNA.214-201ENST00000364201 112 ntBASIC1.4□□□□□ -2.19
LDB1Q86U70 Y_RNA.581-201ENST00000391017 97 ntBASIC1.4□□□□□ -2.19
LDB1Q86U70 RNU6-985P-201ENST00000410182 104 ntBASIC1.4□□□□□ -2.19
LDB1Q86U70 RNY3P15-201ENST00000516297 97 ntBASIC1.4□□□□□ -2.19
LDB1Q86U70 RNU6-1137P-201ENST00000517073 99 ntBASIC1.4□□□□□ -2.19
LDB1Q86U70 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.4□□□□□ -2.19
LDB1Q86U70 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.4□□□□□ -2.19
LDB1Q86U70 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
LDB1Q86U70 Y_RNA.105-201ENST00000363182 111 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 Y_RNA.136-201ENST00000363444 102 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 RNU6-102P-201ENST00000384485 104 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 Y_RNA.569-201ENST00000384749 103 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 RNU6-121P-201ENST00000410525 99 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.39□□□□□ -2.19
LDB1Q86U70 ELOCP20-201ENST00000422460 345 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 AL135790.2-201ENST00000437701 267 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 LINC01399-202ENST00000458450 244 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 CYCTP-201ENST00000504253 315 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 AC136628.3-201ENST00000521868 290 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.39□□□□□ -2.19
LDB1Q86U70 AL512310.8-201ENST00000550183 120 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 MIR4762-201ENST00000585261 75 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 AC120024.3-201ENST00000603167 156 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 AP003357.1-201ENST00000604497 148 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 AC027279.3-201ENST00000625055 122 ntBASIC1.39□□□□□ -2.19
LDB1Q86U70 Y_RNA.19-201ENST00000362462 99 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 U8.1-201ENST00000362843 134 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 RNU6-833P-201ENST00000363486 107 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 Y_RNA.153-201ENST00000363615 91 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 U8.5-201ENST00000364528 136 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 Y_RNA.253-201ENST00000364562 112 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 Y_RNA.422-201ENST00000384054 114 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 RNU6-163P-201ENST00000384396 106 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
LDB1Q86U70 MIR891A-201ENST00000401237 79 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 RNU4-62P-201ENST00000410125 130 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 AC093850.1-201ENST00000454121 251 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 AC092991.1-201ENST00000477176 376 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 RPL30P7-201ENST00000479312 323 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 AC117454.1-201ENST00000491120 168 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 RNU7-115P-201ENST00000516433 55 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 AC024405.2-202ENST00000532731 184 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 AL512598.1-201ENST00000610158 273 ntBASIC1.38□□□□□ -2.19
LDB1Q86U70 MIR378A-201ENST00000362177 66 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 U8.7-201ENST00000364940 136 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 RNU6-290P-201ENST00000365212 101 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 Y_RNA.418-201ENST00000384029 102 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 MIR653-201ENST00000385279 96 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 AC104332.1-201ENST00000440471 797 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 MTND4LP30-201ENST00000454092 297 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 HMGN1P7-201ENST00000491722 313 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 RNU6-191P-201ENST00000516295 94 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 Y_RNA.714-201ENST00000517065 90 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 AL160236.1-201ENST00000556317 195 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 MIR548AY-201ENST00000617669 107 ntBASIC1.37□□□□□ -2.19
LDB1Q86U70 SNORA2.2-201ENST00000365473 135 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.36□□□□□ -2.19
LDB1Q86U70 Y_RNA.638-201ENST00000459374 113 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 AC098869.1-201ENST00000481627 292 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 RPL23AP54-201ENST00000495129 419 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 MRPS35P2-201ENST00000508242 191 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 RNU6-322P-201ENST00000516010 103 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LDB1Q86U70 AP003072.1-201ENST00000531740 145 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 AC090049.2-201ENST00000550377 109 ntBASIC1.36□□□□□ -2.19
LDB1Q86U70 AC127455.1-201ENST00000565496 145 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms