Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU2-38P-201ENST00000410856 79 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 MTND2P29-201ENST00000438595 412 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 RNU1-123P-201ENST00000458950 160 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 AL163195.1-201ENST00000496941 348 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 MIR3618-201ENST00000580330 88 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 AC073413.2-201ENST00000604332 360 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 AP000942.4-201ENST00000604811 241 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 ZNF702P-202ENST00000434269 1966 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 ZNF209P-201ENST00000593450 2304 ntBASIC2.16□□□□□ -2.06
KRT28Q7Z3Y7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.374-201ENST00000365606 101 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 RNU2-7P-201ENST00000410794 178 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 HSPE1P21-201ENST00000438283 308 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 RPS26P45-201ENST00000471748 340 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 AC091959.1-201ENST00000495857 238 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 RNA5SP102-201ENST00000516865 106 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 AC084364.2-201ENST00000546924 395 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 U2.14-201ENST00000615943 113 ntBASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
KRT28Q7Z3Y7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.217-201ENST00000364214 105 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.310-201ENST00000365063 113 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.350-201ENST00000365409 98 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.401-201ENST00000383965 117 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.456-201ENST00000384232 111 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 RN7SKP101-201ENST00000411376 320 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.641-201ENST00000459414 105 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 MIR4287-201ENST00000579398 78 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 AL078604.3-201ENST00000615580 211 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.54-201ENST00000362766 105 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.172-201ENST00000363765 102 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.352-201ENST00000365439 102 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 SNORD116-13-201ENST00000384408 92 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 MIR517C-201ENST00000385103 95 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 RNA5SP511-201ENST00000410487 115 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 AC069257.2-201ENST00000441819 155 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 RPS20P10-201ENST00000451209 253 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 RPL39P38-201ENST00000467018 153 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.680-201ENST00000516441 93 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 SNORA27.4-201ENST00000516650 95 ntBASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.13□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.44-201ENST00000362676 108 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.275-201ENST00000364726 110 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 SNORD48-201ENST00000364953 64 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.307-201ENST00000365022 117 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 SNORD114-22-201ENST00000365423 72 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 RNU6-662P-201ENST00000384253 104 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 MIR17-201ENST00000385012 84 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 RNU7-94P-201ENST00000459576 63 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 RNU1-92P-201ENST00000517017 135 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 AC136628.3-201ENST00000521868 290 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 AL157834.3-201ENST00000615543 103 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 AC068647.2-201ENST00000637380 353 ntBASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.20-201ENST00000362479 113 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 RNU6-801P-201ENST00000364087 105 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 RNU6-53P-201ENST00000365367 106 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.416-201ENST00000384014 113 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.447-201ENST00000384184 113 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 MIR548H3-201ENST00000408771 118 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.618-201ENST00000410949 107 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 SUB1P4-201ENST00000566062 339 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 AC005972.2-201ENST00000604690 348 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 uc_338.20-201ENST00000621563 178 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 MIR6079-201ENST00000635807 62 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 AC018630.2-201ENST00000534866 2403 ntBASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
KRT28Q7Z3Y7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.82-201ENST00000363000 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.92-201ENST00000363043 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.235-201ENST00000364412 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.306-201ENST00000365015 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.312-201ENST00000365089 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.322-201ENST00000365151 102 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 Y_RNA.478-201ENST00000384358 107 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 MIR520A-201ENST00000384862 85 ntBASIC2.1□□□□□ -2.07
KRT28Q7Z3Y7 AL512604.1-201ENST00000404812 257 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms