Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNU6-237P-201ENST00000515985 71 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 RNU7-116P-201ENST00000516940 62 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 AL365434.2-201ENST00000607979 234 ntBASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
NUP54Q7Z3B4 MIRLET7C-201ENST00000362160 84 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.152-201ENST00000363578 100 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 RNU6-1080P-201ENST00000383982 107 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.527-201ENST00000384573 102 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 RNU6-1105P-201ENST00000384774 107 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 SNORA17.3-201ENST00000391159 129 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 MIR1323-201ENST00000408090 73 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.621-201ENST00000411065 96 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 RPL39P38-201ENST00000467018 153 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 RNU6-496P-201ENST00000516145 99 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 RNU6-1153P-201ENST00000516760 105 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 SNORA40.15-201ENST00000516884 107 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 AC131281.1-201ENST00000522984 164 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 MIR3145-201ENST00000580727 82 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 MIR4303-201ENST00000581299 66 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 AL645939.4-201ENST00000604495 135 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.36□□□□□ -2.19
NUP54Q7Z3B4 RNU4-90P-201ENST00000362773 141 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 U8.1-201ENST00000362843 134 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 RNU6-639P-201ENST00000384074 107 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.581-201ENST00000391017 97 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 AL590004.1-201ENST00000405321 300 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.602-201ENST00000410535 92 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 HSPE1P25-201ENST00000455484 251 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 AL512310.8-201ENST00000550183 120 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 AC068647.2-201ENST00000637380 353 ntBASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
NUP54Q7Z3B4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 RNU6-199P-201ENST00000362954 107 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 Y_RNA.136-201ENST00000363444 102 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 RNU6-770P-201ENST00000363929 105 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 ELOCP20-201ENST00000422460 345 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 RNU7-12P-201ENST00000516030 62 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 RNU6-1143P-201ENST00000516125 104 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 RNU6-764P-201ENST00000516396 105 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 MIR4778-201ENST00000577635 80 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 MIR4762-201ENST00000585261 75 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 AP000942.3-201ENST00000603702 160 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 AP003357.1-201ENST00000604497 148 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 AL512598.1-201ENST00000610158 273 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 AL591926.4-201ENST00000616895 298 ntBASIC1.34□□□□□ -2.19
NUP54Q7Z3B4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.105-201ENST00000363182 111 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 RNU4-80P-201ENST00000363200 141 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.210-201ENST00000364161 110 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.214-201ENST00000364201 112 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 U8.5-201ENST00000364528 136 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 RNU6-102P-201ENST00000384485 104 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 RNU6-985P-201ENST00000410182 104 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 RNU6-121P-201ENST00000410525 99 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 AC092991.1-201ENST00000477176 376 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 CYCTP-201ENST00000504253 315 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 RNU6-1137P-201ENST00000517073 99 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 AC136628.3-201ENST00000521868 290 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 CYP3A52P-201ENST00000563326 91 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 POLR3GP1-201ENST00000594073 261 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 AC027279.3-201ENST00000625055 122 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
NUP54Q7Z3B4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 SNORD68-201ENST00000363214 84 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 RNU6-833P-201ENST00000363486 107 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.153-201ENST00000363615 91 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.253-201ENST00000364562 112 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.418-201ENST00000384029 102 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.422-201ENST00000384054 114 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.569-201ENST00000384749 103 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 MIR653-201ENST00000385279 96 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 RNU4-62P-201ENST00000410125 130 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 LINC01399-202ENST00000458450 244 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 RNY3P15-201ENST00000516297 97 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 RNU7-115P-201ENST00000516433 55 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 RN7SKP88-201ENST00000516847 250 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 MIR3124-201ENST00000582636 67 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 AC120024.3-201ENST00000603167 156 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 AL513534.2-201ENST00000603836 250 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 7SK.8-201ENST00000612110 250 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 7SK.11-201ENST00000615477 250 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 7SK.13-201ENST00000622040 250 ntBASIC1.32□□□□□ -2.2
NUP54Q7Z3B4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.19-201ENST00000362462 99 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 Y_RNA.140-201ENST00000363474 103 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 RNU6-290P-201ENST00000365212 101 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 SNORA70.7-201ENST00000384159 133 ntBASIC1.31□□□□□ -2.2
NUP54Q7Z3B4 MIR891A-201ENST00000401237 79 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms