Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 MIR8070-201ENST00000616510 88 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 AC091812.1-201ENST00000432235 1948 ntBASIC1.44□□□□□ -2.18
CCDC30Q5VVM6 MIR26B-201ENST00000362251 77 ntBASIC1.43□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.331-201ENST00000365267 102 ntBASIC1.43□□□□□ -2.18
CCDC30Q5VVM6 SNORA72-201ENST00000384339 132 ntBASIC1.43□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.551-201ENST00000384661 102 ntBASIC1.43□□□□□ -2.18
CCDC30Q5VVM6 MIR891A-201ENST00000401237 79 ntBASIC1.43□□□□□ -2.18
CCDC30Q5VVM6 AL591704.2-201ENST00000421658 181 ntBASIC1.43□□□□□ -2.18
CCDC30Q5VVM6 RPS20P10-201ENST00000451209 253 ntBASIC1.43□□□□□ -2.18
CCDC30Q5VVM6 AC120024.3-201ENST00000603167 156 ntBASIC1.43□□□□□ -2.18
CCDC30Q5VVM6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 SNORD42.2-201ENST00000365570 69 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 SNORD14.1-201ENST00000365609 90 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 SNORD41-201ENST00000386967 70 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.621-201ENST00000411065 96 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 RNA5SP247-201ENST00000411181 105 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 COX6CP14-201ENST00000469580 174 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 AC040926.1-201ENST00000530195 238 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 MIR4295-201ENST00000585286 85 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 AL050343.2-201ENST00000607338 280 ntBASIC1.42□□□□□ -2.18
CCDC30Q5VVM6 RNA5SP327-201ENST00000362494 101 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.172-201ENST00000363765 102 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 SNORA25.8-201ENST00000364831 128 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.368-201ENST00000365547 113 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 RNU6-1323P-201ENST00000384025 107 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.456-201ENST00000384232 111 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 RNU6-1054P-201ENST00000411293 104 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 AC093850.1-201ENST00000454121 251 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 RN7SKP179-201ENST00000516126 217 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 RNU7-116P-201ENST00000516940 62 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 AL591926.4-201ENST00000616895 298 ntBASIC1.41□□□□□ -2.18
CCDC30Q5VVM6 Y_RNA.80-201ENST00000362996 102 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 SNORD68-201ENST00000363214 84 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.471-201ENST00000384312 102 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.485-201ENST00000384395 102 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.509-201ENST00000384506 99 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 RNU6-855P-201ENST00000410395 104 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 MTND1P14-201ENST00000427400 950 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 AC087343.1-201ENST00000477341 475 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 RNU7-110P-201ENST00000516891 62 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 AC019288.1-201ENST00000557918 224 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 AC090971.5-201ENST00000621102 293 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 AC068647.2-201ENST00000637380 353 ntBASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC30Q5VVM6 SNORD81.1-201ENST00000363064 77 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.310-201ENST00000365063 113 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 SNORA63.7-201ENST00000365579 123 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 RNU6-163P-201ENST00000384396 106 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 DYNLT3P2-201ENST00000442517 295 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 RNA5SP102-201ENST00000516865 106 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.714-201ENST00000517065 90 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 C8orf59P2-201ENST00000603441 271 ntBASIC1.39□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.341-201ENST00000365341 102 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 MIR452-201ENST00000385020 85 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 MIR1276-201ENST00000408707 83 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 MTND4P19-201ENST00000446659 478 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 RPL39P39-201ENST00000455840 151 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 SNORA25.10-201ENST00000515926 124 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 SNORA31.4-201ENST00000516049 129 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 AC007485.1-201ENST00000616755 206 ntBASIC1.38□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.424-201ENST00000384063 103 ntBASIC1.37□□□□□ -2.19
CCDC30Q5VVM6 RNU6-21P-201ENST00000384710 107 ntBASIC1.37□□□□□ -2.19
CCDC30Q5VVM6 HMGN1P10-201ENST00000474557 553 ntBASIC1.37□□□□□ -2.19
CCDC30Q5VVM6 RNU6-1116P-201ENST00000517269 99 ntBASIC1.37□□□□□ -2.19
CCDC30Q5VVM6 DEFB117-201ENST00000602356 141 ntBASIC1.37□□□□□ -2.19
CCDC30Q5VVM6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.143-201ENST00000363520 106 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 SNORA25.9-201ENST00000365087 128 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 SNORA70.7-201ENST00000384159 133 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 RNU6-937P-201ENST00000384325 106 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 MIR522-201ENST00000385071 87 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 RNU6-1248P-201ENST00000391096 64 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 AC114811.1-201ENST00000507207 168 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 SEPT14P8-201ENST00000508026 178 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 AP003357.1-201ENST00000604497 148 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 SNORD113-5-201ENST00000607261 78 ntBASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC30Q5VVM6 MIR369-201ENST00000362155 70 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.226-201ENST00000364337 114 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 Y_RNA.419-201ENST00000384041 102 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 MIR526A1-201ENST00000384897 85 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 AC104332.1-201ENST00000440471 797 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 SNORD116-28-201ENST00000516123 91 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 AL022345.2-201ENST00000606307 135 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 SNORD114-21-201ENST00000606412 72 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 AL160413.1-201ENST00000622780 310 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 AC027335.2-201ENST00000624030 375 ntBASIC1.35□□□□□ -2.19
CCDC30Q5VVM6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms