Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 Y_RNA.238-201ENST00000364441 102 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RNU6-296P-201ENST00000384608 107 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 Y_RNA.571-201ENST00000384753 98 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 MIR17-201ENST00000385012 84 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RNA5SP100-201ENST00000410903 110 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RNA5SP59-201ENST00000410922 110 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RNA5SP233-201ENST00000459153 113 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RN7SL429P-201ENST00000479090 223 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RN7SL489P-201ENST00000486185 223 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RN7SL327P-201ENST00000488659 223 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RNA5SP281-201ENST00000516504 135 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 IGLV3-17-201ENST00000519099 244 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 AC098479.1-201ENST00000609225 154 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 RN7SL853P-201ENST00000617250 223 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
ATP13A4Q4VNC1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNU6-103P-201ENST00000363686 107 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 Y_RNA.233-201ENST00000364407 101 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 Y_RNA.253-201ENST00000364562 112 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 SNORA16B-201ENST00000364674 135 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNU4-70P-201ENST00000384579 139 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNU6-950P-201ENST00000384651 107 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 MIR616-201ENST00000385293 97 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNU6-440P-201ENST00000390882 105 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNA5SP212-201ENST00000391223 107 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNU2-2P-201ENST00000410396 191 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RN7SKP101-201ENST00000411376 320 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 AC104435.1-201ENST00000483483 166 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 HMGN1P7-201ENST00000491722 313 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNA5SP437-201ENST00000517249 129 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 AC022559.1-201ENST00000520905 205 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RPL23AP91-201ENST00000569211 455 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 RNU2-4P-201ENST00000606190 192 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 JPX_2.1-201ENST00000614161 69 ntBASIC2.34□□□□□ -2.03
ATP13A4Q4VNC1 ZNF702P-202ENST00000434269 1966 ntBASIC2.34□□□□□ -2.04
ATP13A4Q4VNC1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.34□□□□□ -2.04
ATP13A4Q4VNC1 Y_RNA.265-201ENST00000364677 108 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 MT-TR-201ENST00000387439 65 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 AC245047.8-201ENST00000456455 284 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 RPL23AP63-201ENST00000498752 471 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 SCARNA8-201ENST00000515924 131 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 SNORA31.11-201ENST00000516528 139 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 RNU7-28P-201ENST00000516759 62 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 MIR4287-201ENST00000579398 78 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 AL391903.3-201ENST00000612158 163 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 FTX_2.1-201ENST00000618816 94 ntBASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.33□□□□□ -2.04
ATP13A4Q4VNC1 RNA5SP276-201ENST00000362580 94 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 RN7SKP200-201ENST00000410564 320 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 RNA5SP24-201ENST00000516478 95 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 SNORA31.10-201ENST00000516482 106 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 RNA5SP481-201ENST00000516814 122 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 RNU6-453P-201ENST00000516819 85 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 MIR4744-201ENST00000581563 82 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 AL021707.8-201ENST00000609428 183 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 AL591926.4-201ENST00000616895 298 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 AL590808.1-201ENST00000618696 141 ntBASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.32□□□□□ -2.04
ATP13A4Q4VNC1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 SNORA4.2-201ENST00000365313 147 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 RNA5SP482-201ENST00000391269 118 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 SNRPGP10-201ENST00000432323 225 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 HSPE1P9-201ENST00000440046 311 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 AC023449.1-201ENST00000454464 154 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 RNU6-1007P-201ENST00000516586 107 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 AC091544.4-201ENST00000555268 342 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 MIR3945-201ENST00000581853 98 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 SNORA28-201ENST00000606769 126 ntBASIC2.31□□□□□ -2.04
ATP13A4Q4VNC1 MIR126-201ENST00000362291 85 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 Y_RNA.182-201ENST00000363880 111 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 MT-TT-201ENST00000387460 66 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 RNA5SP508-201ENST00000411327 119 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 STAG3L5P-204ENST00000443759 179 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 SNORD11-201ENST00000459124 84 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 RNA5SP57-201ENST00000459463 123 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 RNU6-861P-201ENST00000516745 106 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 AL773524.1-201ENST00000614065 229 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 AC009831.4-201ENST00000620744 325 ntBASIC2.3□□□□□ -2.04
ATP13A4Q4VNC1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ATP13A4Q4VNC1 RNU6-682P-201ENST00000363843 106 ntBASIC2.29□□□□□ -2.04
ATP13A4Q4VNC1 Y_RNA.270-201ENST00000364693 104 ntBASIC2.29□□□□□ -2.04
ATP13A4Q4VNC1 RNY3P5-201ENST00000384127 102 ntBASIC2.29□□□□□ -2.04
ATP13A4Q4VNC1 RNU6-1228P-201ENST00000391014 107 ntBASIC2.29□□□□□ -2.04
ATP13A4Q4VNC1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.29□□□□□ -2.04
ATP13A4Q4VNC1 AL356379.1-201ENST00000414105 126 ntBASIC2.29□□□□□ -2.04
ATP13A4Q4VNC1 RPS27P21-201ENST00000486977 252 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms