Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNU2-31P-201ENST00000516954 155 ntBASIC1.69□□□□□ -2.14
USP41Q3LFD5 AL117187.1-201ENST00000555482 181 ntBASIC1.69□□□□□ -2.14
USP41Q3LFD5 AL645939.4-201ENST00000604495 135 ntBASIC1.69□□□□□ -2.14
USP41Q3LFD5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
USP41Q3LFD5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
USP41Q3LFD5 AC100821.1-201ENST00000523153 2479 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 MIR337-201ENST00000362281 93 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 SNORA1B-201ENST00000362535 133 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 RNU6-1309P-201ENST00000363305 108 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 Y_RNA.176-201ENST00000363815 109 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 Y_RNA.310-201ENST00000365063 113 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 RNU6-514P-201ENST00000384208 107 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 MIR517C-201ENST00000385103 95 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 SNORA67.6-201ENST00000391093 99 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 RNU6-1248P-201ENST00000391096 64 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 MIR1267-201ENST00000408723 78 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 MTCO1P5-201ENST00000433573 344 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 AC008834.1-201ENST00000511612 175 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 RNU6-191P-201ENST00000516295 94 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 RNU6-1045P-201ENST00000516321 107 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 SCARNA24.2-201ENST00000516968 130 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 MIR3198-2-201ENST00000577868 80 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 AC005972.2-201ENST00000604690 348 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 BX248123.2-201ENST00000606318 124 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.68□□□□□ -2.14
USP41Q3LFD5 MIR8074-201ENST00000615081 81 ntBASIC1.68□□□□□ -2.14
USP41Q3LFD5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
USP41Q3LFD5 Y_RNA.136-201ENST00000363444 102 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 Y_RNA.368-201ENST00000365547 113 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 Y_RNA.456-201ENST00000384232 111 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 RNU6-1031P-201ENST00000384773 107 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 RNU6-1203P-201ENST00000410703 110 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 AL135790.2-201ENST00000437701 267 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 JTBP1-201ENST00000441314 247 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 AC005840.1-201ENST00000498412 377 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 TRMT112P2-201ENST00000512910 132 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 AP002004.2-201ENST00000531656 154 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 AL512605.2-201ENST00000592972 256 ntBASIC1.67□□□□□ -2.14
USP41Q3LFD5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
USP41Q3LFD5 SNORA25.1-201ENST00000362326 128 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 Y_RNA.47-201ENST00000362697 108 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 RNY1P10-201ENST00000363268 113 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 Y_RNA.376-201ENST00000365638 108 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 RNU6-1080P-201ENST00000383982 107 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 RNU6-203P-201ENST00000384038 104 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 RNU6-1105P-201ENST00000384774 107 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 AL034345.1-201ENST00000407768 123 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.66□□□□□ -2.14
USP41Q3LFD5 TRBVB-201ENST00000477100 408 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 AC011604.1-201ENST00000545978 196 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 AC095038.3-201ENST00000634439 195 ntBASIC1.66□□□□□ -2.14
USP41Q3LFD5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.66□□□□□ -2.14
USP41Q3LFD5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
USP41Q3LFD5 Y_RNA.149-201ENST00000363558 117 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 RNU6-326P-201ENST00000365480 107 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 Y_RNA.461-201ENST00000384263 103 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 MIR1302-6-201ENST00000408466 90 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.65□□□□□ -2.15
USP41Q3LFD5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.65□□□□□ -2.15
USP41Q3LFD5 AL358176.2-201ENST00000425769 204 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 AC009474.2-201ENST00000451383 136 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 AL049830.1-201ENST00000468034 425 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 AC005908.1-201ENST00000468701 347 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.65□□□□□ -2.15
USP41Q3LFD5 AC117454.1-201ENST00000491120 168 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
USP41Q3LFD5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 DEFB108E-201ENST00000524692 240 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 POLR3GP1-201ENST00000594073 261 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.65□□□□□ -2.15
USP41Q3LFD5 SNORA28-201ENST00000606769 126 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 AC021506.2-201ENST00000612354 169 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 MIR8062-201ENST00000621515 85 ntBASIC1.65□□□□□ -2.15
USP41Q3LFD5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
USP41Q3LFD5 MIR424-201ENST00000362227 98 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 RNU6-1048P-201ENST00000364054 107 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.64□□□□□ -2.15
USP41Q3LFD5 MTND4LP30-201ENST00000454092 297 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 AC091959.1-201ENST00000495857 238 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 RNU6-1338P-201ENST00000516328 91 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 SNORA31.24-201ENST00000517232 57 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 AC136628.3-201ENST00000521868 290 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.64□□□□□ -2.15
USP41Q3LFD5 AL162424.1-201ENST00000602325 221 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
USP41Q3LFD5 U6.104-201ENST00000637979 90 ntBASIC1.64□□□□□ -2.15
USP41Q3LFD5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
USP41Q3LFD5 AC134026.1-201ENST00000623249 2239 ntBASIC1.63□□□□□ -2.15
USP41Q3LFD5 U8.7-201ENST00000364940 136 ntBASIC1.63□□□□□ -2.15
USP41Q3LFD5 RNU6-1323P-201ENST00000384025 107 ntBASIC1.63□□□□□ -2.15
USP41Q3LFD5 SNORA72-201ENST00000384339 132 ntBASIC1.63□□□□□ -2.15
USP41Q3LFD5 SNORA12.1-201ENST00000390873 148 ntBASIC1.63□□□□□ -2.15
USP41Q3LFD5 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
USP41Q3LFD5 snoU13.9-201ENST00000458927 103 ntBASIC1.63□□□□□ -2.15
USP41Q3LFD5 AC099513.1-201ENST00000490423 301 ntBASIC1.63□□□□□ -2.15
USP41Q3LFD5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.63□□□□□ -2.15
USP41Q3LFD5 AL358944.1-201ENST00000528537 144 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms