Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 MTND5P15-201ENST00000434246 349 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 AL162725.1-201ENST00000435405 301 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 Y_RNA.644-201ENST00000459006 113 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 AC107393.1-201ENST00000512403 346 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 Y_RNA.674-201ENST00000516362 113 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 RNU6-182P-201ENST00000516970 105 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 Z83818.1-201ENST00000603584 150 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 AC005972.2-201ENST00000604690 348 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 AC004792.1-201ENST00000614523 137 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 AC134026.1-201ENST00000623249 2239 ntBASIC1.55□□□□□ -2.16
SNAI3Q3KNW1 Y_RNA.262-201ENST00000364641 102 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 EBAG9P1-201ENST00000418955 543 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 UBL5P3-201ENST00000475112 231 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 AC010409.1-201ENST00000487382 476 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 AC117454.1-201ENST00000491120 168 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 RNY3P16-201ENST00000516338 101 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 RNU7-115P-201ENST00000516433 55 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 RNU7-172P-201ENST00000517125 64 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 RNU7-128P-201ENST00000517247 62 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 AC024405.2-202ENST00000532731 184 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 AC015720.1-201ENST00000565251 277 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 AC005786.1-201ENST00000588553 154 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 AP003357.1-201ENST00000604497 148 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 AC068647.2-201ENST00000637380 353 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 U6.108-201ENST00000637764 58 ntBASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
SNAI3Q3KNW1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 RNU6-47P-201ENST00000383866 107 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 SNORA40.18-201ENST00000391200 128 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 RNU6-918P-201ENST00000391219 106 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 RNA5SP467-201ENST00000391274 118 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 RNA5SP182-201ENST00000516064 82 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 RNU7-99P-201ENST00000516271 62 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 MIR5094-201ENST00000578766 85 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 AC098479.1-201ENST00000609225 154 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 MIR548AY-201ENST00000617669 107 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 FTX_2.1-201ENST00000618816 94 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 AC022513.1-201ENST00000624512 117 ntBASIC1.53□□□□□ -2.16
SNAI3Q3KNW1 RNU6-923P-201ENST00000364753 107 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.308-201ENST00000365043 101 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 RNU6-144P-201ENST00000383951 107 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 RNU6-439P-201ENST00000384188 106 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 RNU6-136P-201ENST00000384663 107 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 MIR583-201ENST00000384846 75 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 MIR626-201ENST00000385032 94 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 MIR548I3-201ENST00000408378 149 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 MIR548I1-201ENST00000408810 149 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.793-201ENST00000411222 111 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 PIGPP3-201ENST00000425307 415 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 CST2P1-201ENST00000425770 87 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 AC099677.2-201ENST00000436385 175 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 HMGN2P23-201ENST00000456759 269 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 RNU7-120P-201ENST00000459334 63 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 YWHAEP4-201ENST00000505390 198 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 RNU7-116P-201ENST00000516940 62 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 SNORA31.17-201ENST00000516953 127 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 AC100767.1-201ENST00000528178 123 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 AC127455.1-201ENST00000565496 145 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 AC024614.2-201ENST00000577584 372 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 MIR4308-201ENST00000580634 81 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 POLR3GP1-201ENST00000594073 261 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 AL359075.3-201ENST00000613288 217 ntBASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SNAI3Q3KNW1 RNU6-862P-201ENST00000362804 105 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 RNU6-1205P-201ENST00000363625 106 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 SNORA33-201ENST00000363664 130 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 RNU6-1020P-201ENST00000363684 107 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 RNU4-10P-201ENST00000364383 140 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.293-201ENST00000364908 93 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 Y_RNA.435-201ENST00000384095 112 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 RNU6-1186P-201ENST00000410429 97 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 SNORA36B-201ENST00000410438 131 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 RPL23AP63-201ENST00000498752 471 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 AP002392.1-201ENST00000537692 208 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 MIR3618-201ENST00000580330 88 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 MIR5688-201ENST00000580619 83 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SNAI3Q3KNW1 SNORA72-201ENST00000384339 132 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms