Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 RNY3P4-201ENST00000384428 101 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 Y_RNA.498-201ENST00000384460 102 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 RNU6-136P-201ENST00000384663 107 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.05□□□□□ -2.24
CSTF1Q05048 MRPL35P3-201ENST00000421557 364 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AC233266.1-201ENST00000454518 96 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 RNU6-625P-201ENST00000459412 107 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AC091021.1-201ENST00000468051 388 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AC097462.1-201ENST00000514125 324 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 RNU6-307P-201ENST00000516743 106 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 Y_RNA.701-201ENST00000516812 110 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 Y_RNA.711-201ENST00000516993 102 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 SNORD116.3-201ENST00000517176 78 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 RNU2-12P-201ENST00000517216 168 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.05□□□□□ -2.24
CSTF1Q05048 AC023442.1-201ENST00000531247 422 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 MIR4659A-201ENST00000580269 81 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AC242852.1-201ENST00000612151 96 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AL513423.1-201ENST00000621695 132 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AC244015.1-201ENST00000622301 99 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 AL606534.2-204ENST00000635008 178 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 U6.115-201ENST00000636045 103 ntBASIC1.05□□□□□ -2.24
CSTF1Q05048 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CSTF1Q05048 RNU6-694P-201ENST00000364071 147 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 RNU6-1264P-201ENST00000383891 107 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 Y_RNA.445-201ENST00000384168 102 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 MIR660-201ENST00000385235 97 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CSTF1Q05048 Y_RNA.605-201ENST00000410577 105 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
CSTF1Q05048 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AC099799.1-201ENST00000439809 192 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 RPEP5-201ENST00000441137 268 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AC093850.1-201ENST00000454121 251 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 RPL39P38-201ENST00000467018 153 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 RNA5SP20-201ENST00000515976 84 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 RNU6-976P-201ENST00000516086 111 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 RNU6-1046P-201ENST00000516538 107 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 RNU6-1291P-201ENST00000516591 104 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.04□□□□□ -2.24
CSTF1Q05048 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.04□□□□□ -2.24
CSTF1Q05048 MIR3973-201ENST00000579824 107 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 MIR3171-201ENST00000584270 74 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AL162424.1-201ENST00000602325 221 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AL022345.2-201ENST00000606307 135 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 SNORA28-201ENST00000606769 126 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AC133104.2-201ENST00000615272 193 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AC240442.1-201ENST00000616055 283 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AC090971.5-201ENST00000621102 293 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 AC090574.1-201ENST00000623186 233 ntBASIC1.04□□□□□ -2.24
CSTF1Q05048 SNORD115-30-201ENST00000364117 82 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 Y_RNA.286-201ENST00000364813 102 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 RNU6-806P-201ENST00000365147 105 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 RNU6-20P-201ENST00000384106 107 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 RNU6-102P-201ENST00000384485 104 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 MIR548P-201ENST00000408336 84 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 RNU6-121P-201ENST00000410525 99 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 AL591704.2-201ENST00000421658 181 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 MTCO2P12-201ENST00000427426 682 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 CALM2P4-201ENST00000430810 426 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 RNA5SP168-201ENST00000516642 112 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 RNU6-63P-201ENST00000516690 95 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CSTF1Q05048 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.03□□□□□ -2.24
CSTF1Q05048 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.03□□□□□ -2.24
CSTF1Q05048 AC136932.1-201ENST00000574771 208 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 RAC1P9-201ENST00000604990 392 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 AC005828.6-201ENST00000606610 232 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 AC004467.1-201ENST00000615678 330 ntBASIC1.03□□□□□ -2.24
CSTF1Q05048 MIR410-201ENST00000362222 80 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 Y_RNA.27-201ENST00000362540 103 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 SNORD81.1-201ENST00000363064 77 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 RNU1-115P-201ENST00000365329 160 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 Y_RNA.361-201ENST00000365515 120 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.02□□□□□ -2.25
CSTF1Q05048 SNORA22-201ENST00000383907 134 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 Y_RNA.460-201ENST00000384255 102 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 RNU6-937P-201ENST00000384325 106 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 SNORD116-13-201ENST00000384408 92 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 SNORA22C-201ENST00000384614 134 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 RNA5SP475-201ENST00000410568 110 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 Y_RNA.631-201ENST00000459607 101 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 RNU7-12P-201ENST00000516030 62 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 RNU6-397P-201ENST00000516226 104 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 RNU7-4P-201ENST00000516961 62 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 VN1R91P-201ENST00000594377 169 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 AC006435.5-201ENST00000624486 112 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 MIR3674-201ENST00000636576 68 ntBASIC1.02□□□□□ -2.25
CSTF1Q05048 AC068700.1-201ENST00000565862 3754 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 AC005592.1-201ENST00000566527 1640 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 RNU6-199P-201ENST00000362954 107 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 RNU6-626P-201ENST00000363354 107 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 RNU6-117P-201ENST00000365415 107 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 Y_RNA.527-201ENST00000384573 102 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 Y_RNA.570-201ENST00000384750 101 ntBASIC1.01□□□□□ -2.25
CSTF1Q05048 MIR193B-201ENST00000384907 83 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms