Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 MIR802-201ENST00000390235 94 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD100-201ENST00000408573 76 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 MTATP6P17-201ENST00000431030 672 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SUMO1P3-201ENST00000439961 304 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AL359672.1-201ENST00000442302 409 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SUMO1P2-201ENST00000452524 304 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 RNU6-135P-201ENST00000516769 101 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 RNU7-181P-201ENST00000517234 74 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC069113.1-201ENST00000517763 267 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AP003181.2-201ENST00000528941 181 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AL137161.1-201ENST00000532231 390 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 LRRC34P1-201ENST00000542742 915 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.13□□□□□ -2.43
COL7A1Q02388 POLR3GP1-201ENST00000594073 261 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC008608.1-201ENST00000603910 127 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 SNORD115-40-201ENST00000606510 82 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 JPX_2.1-201ENST00000614161 69 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC134878.1-201ENST00000619901 243 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC015726.2-201ENST00000620112 122 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC244669.1-204ENST00000621564 178 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AL049777.1-201ENST00000622740 518 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 AC132825.7-201ENST00000638744 335 ntBASIC-0.13□□□□□ -2.43
COL7A1Q02388 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORD114-14-201ENST00000362723 75 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 Y_RNA.53-201ENST00000362765 102 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORD14C-201ENST00000365382 88 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-609P-201ENST00000365459 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORD24-201ENST00000383884 75 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORA36A-201ENST00000384221 132 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC074085.1-201ENST00000413598 418 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MTCO2P21-201ENST00000419780 677 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC008134.1-201ENST00000420943 193 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR18B-201ENST00000454574 71 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORD42A-201ENST00000459584 64 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC112204.1-201ENST00000502591 103 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MTCO2P30-201ENST00000503662 364 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC010587.1-201ENST00000505809 469 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC046134.1-201ENST00000514454 666 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-320P-201ENST00000516511 106 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-612P-201ENST00000516909 102 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR5692A1-201ENST00000580523 69 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR4762-201ENST00000585261 75 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC121247.2-201ENST00000604776 136 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC011921.3-201ENST00000605540 361 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AP002802.2-201ENST00000605877 235 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC092807.2-201ENST00000609367 243 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 AL162726.3-218ENST00000636401 95 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORD115-7-201ENST00000365306 82 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-354P-201ENST00000383862 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-224P-201ENST00000384055 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-610P-201ENST00000384264 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-318P-201ENST00000384283 103 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-880P-201ENST00000384526 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-83P-201ENST00000384568 112 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR516B1-201ENST00000385211 90 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORD83B-201ENST00000386745 93 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR450B-201ENST00000401182 78 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-602P-201ENST00000411155 105 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC244250.2-201ENST00000418731 148 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC006210.1-201ENST00000424882 111 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 Z98949.2-201ENST00000440996 144 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MTCO3P38-201ENST00000468910 766 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MTCO1P29-201ENST00000496868 288 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-765P-201ENST00000516916 99 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MTND1P35-201ENST00000526739 508 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC005357.1-201ENST00000588399 301 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC008536.2-201ENST00000607284 349 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-1192P-201ENST00000612197 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 AC009159.2-201ENST00000617603 606 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-489P-201ENST00000618289 107 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 MIR342-201ENST00000362212 99 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 RNU6-371P-201ENST00000364283 108 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 Y_RNA.367-201ENST00000365544 101 ntBASIC-0.14□□□□□ -2.43
COL7A1Q02388 SNORD14.1-201ENST00000365609 90 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms