Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.15□□□□□ -2.07
E2F1Q01094 RPS26P45-201ENST00000471748 340 ntBASIC2.15□□□□□ -2.07
E2F1Q01094 RPL23AP54-201ENST00000495129 419 ntBASIC2.15□□□□□ -2.07
E2F1Q01094 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.15□□□□□ -2.07
E2F1Q01094 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
E2F1Q01094 Y_RNA.24-201ENST00000362508 103 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 Y_RNA.121-201ENST00000363309 113 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 RNA5SP99-201ENST00000364020 114 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 Y_RNA.238-201ENST00000364441 102 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 Y_RNA.572-201ENST00000384757 98 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.14□□□□□ -2.07
E2F1Q01094 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.14□□□□□ -2.07
E2F1Q01094 RNU6-437P-201ENST00000459408 95 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 RN7SKP164-201ENST00000516138 266 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 RNA5SP458-201ENST00000516188 119 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 RNU1-142P-201ENST00000516682 145 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 RNU6-255P-201ENST00000516957 105 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 AC024995.1-201ENST00000523014 93 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 MIR4724-201ENST00000579485 89 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 AC005786.1-201ENST00000588553 154 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 U6.106-201ENST00000636360 105 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 ZNF720P1-201ENST00000562403 1939 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
E2F1Q01094 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
E2F1Q01094 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
E2F1Q01094 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 MIR367-201ENST00000362299 68 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 RNU6-674P-201ENST00000363831 107 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 snoU2_19.4-201ENST00000364329 80 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 Y_RNA.240-201ENST00000364469 95 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 RNU6-969P-201ENST00000383900 105 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 MIR518A2-201ENST00000384966 87 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 MIR520G-201ENST00000385064 90 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 RNU11-5P-201ENST00000391216 129 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 HMGN2P39-201ENST00000398005 273 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 MIR1283-2-201ENST00000408621 87 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 RNU2-2P-201ENST00000410396 191 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 RNU6-1219P-201ENST00000516143 112 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 RNU6-1096P-201ENST00000517089 102 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 AC091178.2-201ENST00000584401 117 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 RNU2-4P-201ENST00000606190 192 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 SNORD14A-201ENST00000606526 91 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 MIR203B-201ENST00000636080 86 ntBASIC2.13□□□□□ -2.07
E2F1Q01094 AC100821.1-201ENST00000523153 2479 ntBASIC2.12□□□□□ -2.07
E2F1Q01094 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
E2F1Q01094 RNU6-383P-201ENST00000410864 94 ntBASIC2.12□□□□□ -2.07
E2F1Q01094 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
E2F1Q01094 AC091021.1-201ENST00000468051 388 ntBASIC2.12□□□□□ -2.07
E2F1Q01094 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
E2F1Q01094 AC011604.1-201ENST00000545978 196 ntBASIC2.12□□□□□ -2.07
E2F1Q01094 AC018630.2-201ENST00000534866 2403 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
E2F1Q01094 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
E2F1Q01094 ZNF355P-201ENST00000427301 3216 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 RNU6-103P-201ENST00000363686 107 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 SNORA67.3-201ENST00000384366 140 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 SNORA8-201ENST00000384574 139 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 MIR597-201ENST00000384968 97 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 MIR616-201ENST00000385293 97 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 RNA5SP323-201ENST00000391094 133 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 RNA5SP465-201ENST00000391195 109 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 SNORA26.9-201ENST00000391322 122 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 RN7SKP51-201ENST00000410781 304 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 AC074198.2-201ENST00000508153 258 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 SCARNA8-201ENST00000515924 131 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 Y_RNA.662-201ENST00000516028 97 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 AL929325.1-201ENST00000603096 117 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 MIR6079-201ENST00000635807 62 ntBASIC2.11□□□□□ -2.07
E2F1Q01094 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
E2F1Q01094 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
E2F1Q01094 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
E2F1Q01094 Y_RNA.229-201ENST00000364347 113 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 RNU11-3P-201ENST00000391111 133 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 AC019129.1-201ENST00000403786 261 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 MIR1278-201ENST00000408753 81 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 AL163195.1-201ENST00000496941 348 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 RNU6-295P-201ENST00000516901 104 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.1□□□□□ -2.07
E2F1Q01094 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.1□□□□□ -2.07
E2F1Q01094 AL391903.3-201ENST00000612158 163 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
E2F1Q01094 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.09□□□□□ -2.07
E2F1Q01094 Y_RNA.75-201ENST00000362927 97 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 Y_RNA.182-201ENST00000363880 111 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 Y_RNA.412-201ENST00000384001 104 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 Y_RNA.464-201ENST00000384282 110 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 RNA5SP270-201ENST00000411361 118 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 RN7SKP101-201ENST00000411376 320 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 AL445646.1-201ENST00000431784 216 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 RNU7-94P-201ENST00000459576 63 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 RNU6-453P-201ENST00000516819 85 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 RNU6-341P-201ENST00000516973 96 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 MRPS18CP4-201ENST00000535821 231 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 MIR4744-201ENST00000581563 82 ntBASIC2.09□□□□□ -2.07
E2F1Q01094 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms