Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC005972.2-201ENST00000604690 348 ntBASIC0.59□□□□□ -2.31
CBX1P83916 AL136317.1-201ENST00000612653 226 ntBASIC0.59□□□□□ -2.31
CBX1P83916 MIR6504-201ENST00000613520 61 ntBASIC0.59□□□□□ -2.31
CBX1P83916 MIR8070-201ENST00000616510 88 ntBASIC0.59□□□□□ -2.31
CBX1P83916 MIR96-201ENST00000362288 78 ntBASIC0.58□□□□□ -2.32
CBX1P83916 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
CBX1P83916 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
CBX1P83916 MTND1P34-201ENST00000438556 671 ntBASIC0.58□□□□□ -2.32
CBX1P83916 AC069439.1-201ENST00000494739 167 ntBASIC0.58□□□□□ -2.32
CBX1P83916 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.58□□□□□ -2.32
CBX1P83916 RNU6-155P-201ENST00000516347 100 ntBASIC0.58□□□□□ -2.32
CBX1P83916 RNU6-358P-201ENST00000516564 75 ntBASIC0.58□□□□□ -2.32
CBX1P83916 RNU11-2P-201ENST00000516898 142 ntBASIC0.58□□□□□ -2.32
CBX1P83916 Y_RNA.714-201ENST00000517065 90 ntBASIC0.58□□□□□ -2.32
CBX1P83916 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
CBX1P83916 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
CBX1P83916 SNORD50B-201ENST00000364995 70 ntBASIC0.57□□□□□ -2.32
CBX1P83916 SNORA72-201ENST00000384339 132 ntBASIC0.57□□□□□ -2.32
CBX1P83916 SNORD111-201ENST00000408139 94 ntBASIC0.57□□□□□ -2.32
CBX1P83916 RNU6-994P-201ENST00000410507 111 ntBASIC0.57□□□□□ -2.32
CBX1P83916 SNRPGP10-201ENST00000432323 225 ntBASIC0.57□□□□□ -2.32
CBX1P83916 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.57□□□□□ -2.32
CBX1P83916 RNU7-4P-201ENST00000516961 62 ntBASIC0.57□□□□□ -2.32
CBX1P83916 AC144568.1-201ENST00000520139 137 ntBASIC0.57□□□□□ -2.32
CBX1P83916 AC036111.3-201ENST00000526389 112 ntBASIC0.57□□□□□ -2.32
CBX1P83916 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.57□□□□□ -2.32
CBX1P83916 AC073869.6-201ENST00000640656 341 ntBASIC0.57□□□□□ -2.32
CBX1P83916 RNU6-20P-201ENST00000384106 107 ntBASIC0.56□□□□□ -2.32
CBX1P83916 Y_RNA.446-201ENST00000384178 104 ntBASIC0.56□□□□□ -2.32
CBX1P83916 RNY3P4-201ENST00000384428 101 ntBASIC0.56□□□□□ -2.32
CBX1P83916 SNORD78.2-201ENST00000391076 69 ntBASIC0.56□□□□□ -2.32
CBX1P83916 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CBX1P83916 PRDX4P1-201ENST00000507189 574 ntBASIC0.56□□□□□ -2.32
CBX1P83916 RNU6-120P-201ENST00000516077 103 ntBASIC0.56□□□□□ -2.32
CBX1P83916 RNU6-436P-201ENST00000516171 114 ntBASIC0.56□□□□□ -2.32
CBX1P83916 Y_RNA.676-201ENST00000516393 96 ntBASIC0.56□□□□□ -2.32
CBX1P83916 AC093027.1-201ENST00000546698 429 ntBASIC0.56□□□□□ -2.32
CBX1P83916 RNU6-626P-201ENST00000363354 107 ntBASIC0.55□□□□□ -2.32
CBX1P83916 RNU6-767P-201ENST00000384132 107 ntBASIC0.55□□□□□ -2.32
CBX1P83916 RNU6-1067P-201ENST00000384752 107 ntBASIC0.55□□□□□ -2.32
CBX1P83916 SNORA75.6-201ENST00000391318 127 ntBASIC0.55□□□□□ -2.32
CBX1P83916 RNU6-1199P-201ENST00000411249 104 ntBASIC0.55□□□□□ -2.32
CBX1P83916 MTND1P4-201ENST00000435196 415 ntBASIC0.55□□□□□ -2.32
CBX1P83916 Y_RNA.635-201ENST00000459041 101 ntBASIC0.55□□□□□ -2.32
CBX1P83916 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.55□□□□□ -2.32
CBX1P83916 RNA5SP220-201ENST00000516298 104 ntBASIC0.55□□□□□ -2.32
CBX1P83916 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
CBX1P83916 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
CBX1P83916 RNU6-1012P-201ENST00000516606 109 ntBASIC0.55□□□□□ -2.32
CBX1P83916 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.55□□□□□ -2.32
CBX1P83916 CYP3A137P-201ENST00000562436 69 ntBASIC0.55□□□□□ -2.32
CBX1P83916 AC093783.1-201ENST00000612976 329 ntBASIC0.55□□□□□ -2.32
CBX1P83916 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.55□□□□□ -2.32
CBX1P83916 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.55□□□□□ -2.32
CBX1P83916 MIR4251-201ENST00000635819 61 ntBASIC0.55□□□□□ -2.32
CBX1P83916 AC134026.1-201ENST00000623249 2239 ntBASIC0.54□□□□□ -2.32
CBX1P83916 MIR373-201ENST00000362273 69 ntBASIC0.54□□□□□ -2.32
CBX1P83916 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CBX1P83916 MIR499A-201ENST00000384903 122 ntBASIC0.54□□□□□ -2.32
CBX1P83916 RNU6-192P-201ENST00000391253 100 ntBASIC0.54□□□□□ -2.32
CBX1P83916 MIR1276-201ENST00000408707 83 ntBASIC0.54□□□□□ -2.32
CBX1P83916 RNU4-14P-201ENST00000410858 122 ntBASIC0.54□□□□□ -2.32
CBX1P83916 RNU6-1304P-201ENST00000411374 106 ntBASIC0.54□□□□□ -2.32
CBX1P83916 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.54□□□□□ -2.32
CBX1P83916 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CBX1P83916 AC084782.3-201ENST00000612282 578 ntBASIC0.54□□□□□ -2.32
CBX1P83916 AC008133.2-201ENST00000624540 351 ntBASIC0.54□□□□□ -2.32
CBX1P83916 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
CBX1P83916 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
CBX1P83916 SNORD113.3-201ENST00000364630 78 ntBASIC0.53□□□□□ -2.32
CBX1P83916 Y_RNA.368-201ENST00000365547 113 ntBASIC0.53□□□□□ -2.32
CBX1P83916 RNU1-119P-201ENST00000391122 165 ntBASIC0.53□□□□□ -2.32
CBX1P83916 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.53□□□□□ -2.32
CBX1P83916 Y_RNA.605-201ENST00000410577 105 ntBASIC0.53□□□□□ -2.32
CBX1P83916 Y_RNA.646-201ENST00000410980 101 ntBASIC0.53□□□□□ -2.32
CBX1P83916 RNU6-370P-201ENST00000411008 104 ntBASIC0.53□□□□□ -2.32
CBX1P83916 AL392103.1-201ENST00000447000 198 ntBASIC0.53□□□□□ -2.32
CBX1P83916 RPL30P15-201ENST00000457129 321 ntBASIC0.53□□□□□ -2.32
CBX1P83916 RNU7-169P-201ENST00000459456 61 ntBASIC0.53□□□□□ -2.32
CBX1P83916 MTND4P17-201ENST00000470444 350 ntBASIC0.53□□□□□ -2.32
CBX1P83916 DEFB108E-201ENST00000524692 240 ntBASIC0.53□□□□□ -2.32
CBX1P83916 AC098679.4-201ENST00000624241 654 ntBASIC0.53□□□□□ -2.32
CBX1P83916 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
CBX1P83916 AC068700.1-201ENST00000565862 3754 ntBASIC0.52□□□□□ -2.33
CBX1P83916 Y_RNA.146-201ENST00000363549 102 ntBASIC0.52□□□□□ -2.33
CBX1P83916 SNORD14E-201ENST00000364009 85 ntBASIC0.52□□□□□ -2.33
CBX1P83916 RNU6-710P-201ENST00000410424 105 ntBASIC0.52□□□□□ -2.33
CBX1P83916 AC005534.2-201ENST00000431047 433 ntBASIC0.52□□□□□ -2.33
CBX1P83916 Y_RNA.691-201ENST00000516611 103 ntBASIC0.52□□□□□ -2.33
CBX1P83916 AC004812.1-201ENST00000540773 146 ntBASIC0.52□□□□□ -2.33
CBX1P83916 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
CBX1P83916 AC011195.1-201ENST00000578177 177 ntBASIC0.52□□□□□ -2.33
CBX1P83916 MIR4659A-201ENST00000580269 81 ntBASIC0.52□□□□□ -2.33
CBX1P83916 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.52□□□□□ -2.33
CBX1P83916 AC011476.5-201ENST00000615594 130 ntBASIC0.52□□□□□ -2.33
CBX1P83916 MIR6516-201ENST00000630554 81 ntBASIC0.52□□□□□ -2.33
CBX1P83916 Y_RNA.148-201ENST00000363557 117 ntBASIC0.51□□□□□ -2.33
CBX1P83916 Y_RNA.230-201ENST00000364348 109 ntBASIC0.51□□□□□ -2.33
CBX1P83916 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
CBX1P83916 RNU1-93P-201ENST00000364704 169 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 487.5 ms