Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SNORD116-13-201ENST00000384408 92 ntBASIC0.69□□□□□ -2.3
IRX3P78415 RNY3P4-201ENST00000384428 101 ntBASIC0.69□□□□□ -2.3
IRX3P78415 Y_RNA.592-201ENST00000410274 109 ntBASIC0.69□□□□□ -2.3
IRX3P78415 RNU2-54P-201ENST00000410299 190 ntBASIC0.69□□□□□ -2.3
IRX3P78415 RNU6-710P-201ENST00000410424 105 ntBASIC0.69□□□□□ -2.3
IRX3P78415 AC098934.3-201ENST00000430450 190 ntBASIC0.69□□□□□ -2.3
IRX3P78415 AC104332.1-201ENST00000440471 797 ntBASIC0.69□□□□□ -2.3
IRX3P78415 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.69□□□□□ -2.3
IRX3P78415 SNORD111.1-201ENST00000516421 86 ntBASIC0.69□□□□□ -2.3
IRX3P78415 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.69□□□□□ -2.3
IRX3P78415 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.69□□□□□ -2.3
IRX3P78415 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.69□□□□□ -2.3
IRX3P78415 AC133104.2-201ENST00000615272 193 ntBASIC0.69□□□□□ -2.3
IRX3P78415 AC004467.1-201ENST00000615678 330 ntBASIC0.69□□□□□ -2.3
IRX3P78415 AL589743.1-201ENST00000551932 2712 ntBASIC0.69□□□□□ -2.3
IRX3P78415 AC068700.1-201ENST00000565862 3754 ntBASIC0.68□□□□□ -2.3
IRX3P78415 Y_RNA.363-201ENST00000365529 113 ntBASIC0.68□□□□□ -2.3
IRX3P78415 Y_RNA.404-201ENST00000383978 102 ntBASIC0.68□□□□□ -2.3
IRX3P78415 MIR136-201ENST00000385207 82 ntBASIC0.68□□□□□ -2.3
IRX3P78415 SNORA75.6-201ENST00000391318 127 ntBASIC0.68□□□□□ -2.3
IRX3P78415 AL589823.1-201ENST00000429577 183 ntBASIC0.68□□□□□ -2.3
IRX3P78415 AC092628.1-201ENST00000436250 252 ntBASIC0.68□□□□□ -2.3
IRX3P78415 PRDX4P1-201ENST00000507189 574 ntBASIC0.68□□□□□ -2.3
IRX3P78415 RNU6-408P-201ENST00000515910 100 ntBASIC0.68□□□□□ -2.3
IRX3P78415 RNU6-496P-201ENST00000516145 99 ntBASIC0.68□□□□□ -2.3
IRX3P78415 RNU6-1337P-201ENST00000516525 95 ntBASIC0.68□□□□□ -2.3
IRX3P78415 RNU6-229P-201ENST00000516614 102 ntBASIC0.68□□□□□ -2.3
IRX3P78415 RNU7-30P-201ENST00000516835 62 ntBASIC0.68□□□□□ -2.3
IRX3P78415 RNU11-2P-201ENST00000516898 142 ntBASIC0.68□□□□□ -2.3
IRX3P78415 AC090142.3-201ENST00000519012 385 ntBASIC0.68□□□□□ -2.3
IRX3P78415 AC025627.3-201ENST00000582078 182 ntBASIC0.68□□□□□ -2.3
IRX3P78415 RNU6-845P-201ENST00000362578 103 ntBASIC0.67□□□□□ -2.3
IRX3P78415 SNORD68-201ENST00000363214 84 ntBASIC0.67□□□□□ -2.3
IRX3P78415 RNU6-969P-201ENST00000383900 105 ntBASIC0.67□□□□□ -2.3
IRX3P78415 MIR942-201ENST00000401111 86 ntBASIC0.67□□□□□ -2.3
IRX3P78415 RNU6-1156P-201ENST00000410365 100 ntBASIC0.67□□□□□ -2.3
IRX3P78415 RNA5SP511-201ENST00000410487 115 ntBASIC0.67□□□□□ -2.3
IRX3P78415 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.67□□□□□ -2.3
IRX3P78415 RPS26P48-201ENST00000491713 339 ntBASIC0.67□□□□□ -2.3
IRX3P78415 RNU7-43P-201ENST00000516554 64 ntBASIC0.67□□□□□ -2.3
IRX3P78415 SNORA74.3-201ENST00000517108 154 ntBASIC0.67□□□□□ -2.3
IRX3P78415 AC240442.1-201ENST00000616055 283 ntBASIC0.67□□□□□ -2.3
IRX3P78415 MIR5087-201ENST00000635826 76 ntBASIC0.67□□□□□ -2.3
IRX3P78415 RNA5SP264-201ENST00000363115 107 ntBASIC0.66□□□□□ -2.3
IRX3P78415 RNA5SP48-201ENST00000363969 126 ntBASIC0.66□□□□□ -2.3
IRX3P78415 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
IRX3P78415 RNU6-99P-201ENST00000364721 107 ntBASIC0.66□□□□□ -2.3
IRX3P78415 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
IRX3P78415 SNORD78.2-201ENST00000391076 69 ntBASIC0.66□□□□□ -2.3
IRX3P78415 RNU2-61P-201ENST00000411069 191 ntBASIC0.66□□□□□ -2.3
IRX3P78415 AL390729.2-201ENST00000416137 156 ntBASIC0.66□□□□□ -2.3
IRX3P78415 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.66□□□□□ -2.3
IRX3P78415 SNORD124-201ENST00000459577 104 ntBASIC0.66□□□□□ -2.3
IRX3P78415 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
IRX3P78415 AC005176.2-201ENST00000596933 147 ntBASIC0.66□□□□□ -2.3
IRX3P78415 AC005972.2-201ENST00000604690 348 ntBASIC0.66□□□□□ -2.3
IRX3P78415 RBM11P1-201ENST00000604951 799 ntBASIC0.66□□□□□ -2.3
IRX3P78415 AC098679.4-201ENST00000624241 654 ntBASIC0.66□□□□□ -2.3
IRX3P78415 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.66□□□□□ -2.3
IRX3P78415 AL669831.3-213ENST00000636676 183 ntBASIC0.66□□□□□ -2.3
IRX3P78415 MIR924-201ENST00000638017 53 ntBASIC0.66□□□□□ -2.3
IRX3P78415 Y_RNA.242-201ENST00000364473 110 ntBASIC0.65□□□□□ -2.31
IRX3P78415 Y_RNA.279-201ENST00000364763 95 ntBASIC0.65□□□□□ -2.31
IRX3P78415 Y_RNA.473-201ENST00000384333 102 ntBASIC0.65□□□□□ -2.31
IRX3P78415 RNU6-136P-201ENST00000384663 107 ntBASIC0.65□□□□□ -2.31
IRX3P78415 MIR526A1-201ENST00000384897 85 ntBASIC0.65□□□□□ -2.31
IRX3P78415 AL031003.1-201ENST00000404229 172 ntBASIC0.65□□□□□ -2.31
IRX3P78415 MIR1298-201ENST00000408783 112 ntBASIC0.65□□□□□ -2.31
IRX3P78415 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.65□□□□□ -2.31
IRX3P78415 Y_RNA.621-201ENST00000411065 96 ntBASIC0.65□□□□□ -2.31
IRX3P78415 RPEP5-201ENST00000441137 268 ntBASIC0.65□□□□□ -2.31
IRX3P78415 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.65□□□□□ -2.31
IRX3P78415 AC114811.1-201ENST00000507207 168 ntBASIC0.65□□□□□ -2.31
IRX3P78415 AC087685.1-201ENST00000587507 141 ntBASIC0.65□□□□□ -2.31
IRX3P78415 AL096861.1-201ENST00000610899 123 ntBASIC0.65□□□□□ -2.31
IRX3P78415 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
IRX3P78415 MIR1244-1-201ENST00000612829 85 ntBASIC0.65□□□□□ -2.31
IRX3P78415 U6atac.1-201ENST00000616025 117 ntBASIC0.65□□□□□ -2.31
IRX3P78415 AL591926.4-201ENST00000616895 298 ntBASIC0.65□□□□□ -2.31
IRX3P78415 AC087588.2-201ENST00000617667 426 ntBASIC0.65□□□□□ -2.31
IRX3P78415 MIR1244-3-201ENST00000635744 85 ntBASIC0.65□□□□□ -2.31
IRX3P78415 MIR1244-2-201ENST00000636449 85 ntBASIC0.65□□□□□ -2.31
IRX3P78415 MIR1244-4-202ENST00000636813 85 ntBASIC0.65□□□□□ -2.31
IRX3P78415 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
IRX3P78415 snoU2-30.1-201ENST00000365012 70 ntBASIC0.64□□□□□ -2.31
IRX3P78415 Y_RNA.370-201ENST00000365589 108 ntBASIC0.64□□□□□ -2.31
IRX3P78415 SNORA72-201ENST00000384339 132 ntBASIC0.64□□□□□ -2.31
IRX3P78415 RPS3AP1-201ENST00000413190 320 ntBASIC0.64□□□□□ -2.31
IRX3P78415 AC099799.1-201ENST00000439809 192 ntBASIC0.64□□□□□ -2.31
IRX3P78415 CHEK2P4-201ENST00000450340 246 ntBASIC0.64□□□□□ -2.31
IRX3P78415 RPS20P10-201ENST00000451209 253 ntBASIC0.64□□□□□ -2.31
IRX3P78415 U7.7-201ENST00000459276 60 ntBASIC0.64□□□□□ -2.31
IRX3P78415 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.64□□□□□ -2.31
IRX3P78415 RNU7-116P-201ENST00000516940 62 ntBASIC0.64□□□□□ -2.31
IRX3P78415 AP003716.2-201ENST00000528260 108 ntBASIC0.64□□□□□ -2.31
IRX3P78415 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.64□□□□□ -2.31
IRX3P78415 SEPT14P17-201ENST00000617978 177 ntBASIC0.64□□□□□ -2.31
IRX3P78415 RNU6-1084P-201ENST00000362498 107 ntBASIC0.63□□□□□ -2.31
IRX3P78415 SNORD14.1-201ENST00000365609 90 ntBASIC0.63□□□□□ -2.31
IRX3P78415 RNU6-1067P-201ENST00000384752 107 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 186.7 ms