Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 Y_RNA.621-201ENST00000411065 96 ntBASIC1.95□□□□□ -2.1
RAE1P78406 RN7SKP101-201ENST00000411376 320 ntBASIC1.95□□□□□ -2.1
RAE1P78406 AL356320.1-201ENST00000429616 163 ntBASIC1.95□□□□□ -2.1
RAE1P78406 AC121758.2-201ENST00000553271 193 ntBASIC1.95□□□□□ -2.1
RAE1P78406 SNORD53-201ENST00000579969 78 ntBASIC1.95□□□□□ -2.1
RAE1P78406 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
RAE1P78406 AC072026.1-201ENST00000605023 201 ntBASIC1.95□□□□□ -2.1
RAE1P78406 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.95□□□□□ -2.1
RAE1P78406 AL021707.8-201ENST00000609428 183 ntBASIC1.95□□□□□ -2.1
RAE1P78406 AL391903.3-201ENST00000612158 163 ntBASIC1.95□□□□□ -2.1
RAE1P78406 AC004792.1-201ENST00000614523 137 ntBASIC1.95□□□□□ -2.1
RAE1P78406 MIR6873-201ENST00000622788 63 ntBASIC1.95□□□□□ -2.1
RAE1P78406 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
RAE1P78406 RNU6-103P-201ENST00000363686 107 ntBASIC1.94□□□□□ -2.1
RAE1P78406 Y_RNA.229-201ENST00000364347 113 ntBASIC1.94□□□□□ -2.1
RAE1P78406 RNU4-41P-201ENST00000364426 143 ntBASIC1.94□□□□□ -2.1
RAE1P78406 RNU6-950P-201ENST00000384651 107 ntBASIC1.94□□□□□ -2.1
RAE1P78406 Y_RNA.571-201ENST00000384753 98 ntBASIC1.94□□□□□ -2.1
RAE1P78406 MIR616-201ENST00000385293 97 ntBASIC1.94□□□□□ -2.1
RAE1P78406 RNA5SP496-201ENST00000391240 109 ntBASIC1.94□□□□□ -2.1
RAE1P78406 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
RAE1P78406 UBE2DNL-203ENST00000474922 222 ntBASIC1.94□□□□□ -2.1
RAE1P78406 AC008413.1-201ENST00000511864 177 ntBASIC1.94□□□□□ -2.1
RAE1P78406 RNU1-40P-201ENST00000516816 164 ntBASIC1.94□□□□□ -2.1
RAE1P78406 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
RAE1P78406 IGLV3-17-201ENST00000519099 244 ntBASIC1.94□□□□□ -2.1
RAE1P78406 MIR4513-201ENST00000581077 86 ntBASIC1.94□□□□□ -2.1
RAE1P78406 MIR5694-201ENST00000581190 76 ntBASIC1.94□□□□□ -2.1
RAE1P78406 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.94□□□□□ -2.1
RAE1P78406 MIR8054-201ENST00000620877 86 ntBASIC1.94□□□□□ -2.1
RAE1P78406 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
RAE1P78406 AC008555.8-201ENST00000623602 2168 ntBASIC1.93□□□□□ -2.1
RAE1P78406 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.93□□□□□ -2.1
RAE1P78406 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
RAE1P78406 Y_RNA.796-201ENST00000364268 102 ntBASIC1.93□□□□□ -2.1
RAE1P78406 snoU2_19.4-201ENST00000364329 80 ntBASIC1.93□□□□□ -2.1
RAE1P78406 Y_RNA.233-201ENST00000364407 101 ntBASIC1.93□□□□□ -2.1
RAE1P78406 Y_RNA.253-201ENST00000364562 112 ntBASIC1.93□□□□□ -2.1
RAE1P78406 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
RAE1P78406 Y_RNA.799-201ENST00000364992 102 ntBASIC1.93□□□□□ -2.1
RAE1P78406 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
RAE1P78406 Y_RNA.572-201ENST00000384757 98 ntBASIC1.93□□□□□ -2.1
RAE1P78406 AL512604.1-201ENST00000404812 257 ntBASIC1.93□□□□□ -2.1
RAE1P78406 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
RAE1P78406 RNU2-2P-201ENST00000410396 191 ntBASIC1.93□□□□□ -2.1
RAE1P78406 RNA5SP100-201ENST00000410903 110 ntBASIC1.93□□□□□ -2.1
RAE1P78406 RNA5SP59-201ENST00000410922 110 ntBASIC1.93□□□□□ -2.1
RAE1P78406 PIGPP3-201ENST00000425307 415 ntBASIC1.93□□□□□ -2.1
RAE1P78406 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.93□□□□□ -2.1
RAE1P78406 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.93□□□□□ -2.1
RAE1P78406 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.93□□□□□ -2.1
RAE1P78406 RNA5SP437-201ENST00000517249 129 ntBASIC1.93□□□□□ -2.1
RAE1P78406 MIR1273D-201ENST00000577266 86 ntBASIC1.93□□□□□ -2.1
RAE1P78406 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
RAE1P78406 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
RAE1P78406 MIR6840-201ENST00000611937 71 ntBASIC1.93□□□□□ -2.1
RAE1P78406 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.93□□□□□ -2.1
RAE1P78406 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
RAE1P78406 FTX_2.1-201ENST00000618816 94 ntBASIC1.93□□□□□ -2.1
RAE1P78406 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.93□□□□□ -2.1
RAE1P78406 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RAE1P78406 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
RAE1P78406 AL596028.1-201ENST00000326971 197 ntBASIC1.92□□□□□ -2.1
RAE1P78406 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RAE1P78406 RNU4-70P-201ENST00000384579 139 ntBASIC1.92□□□□□ -2.1
RAE1P78406 MIR1278-201ENST00000408753 81 ntBASIC1.92□□□□□ -2.1
RAE1P78406 RN7SKP223-201ENST00000410582 62 ntBASIC1.92□□□□□ -2.1
RAE1P78406 AL049830.1-201ENST00000468034 425 ntBASIC1.92□□□□□ -2.1
RAE1P78406 HMGN1P7-201ENST00000491722 313 ntBASIC1.92□□□□□ -2.1
RAE1P78406 RPL23AP63-201ENST00000498752 471 ntBASIC1.92□□□□□ -2.1
RAE1P78406 RNU7-28P-201ENST00000516759 62 ntBASIC1.92□□□□□ -2.1
RAE1P78406 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.92□□□□□ -2.1
RAE1P78406 JPX_2.1-201ENST00000614161 69 ntBASIC1.92□□□□□ -2.1
RAE1P78406 AL590808.1-201ENST00000618696 141 ntBASIC1.92□□□□□ -2.1
RAE1P78406 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.92□□□□□ -2.1
RAE1P78406 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RAE1P78406 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RAE1P78406 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RAE1P78406 RNU6-1209P-201ENST00000363655 107 ntBASIC1.91□□□□□ -2.1
RAE1P78406 Y_RNA.238-201ENST00000364441 102 ntBASIC1.91□□□□□ -2.1
RAE1P78406 RNU6-440P-201ENST00000390882 105 ntBASIC1.91□□□□□ -2.1
RAE1P78406 RNA5SP482-201ENST00000391269 118 ntBASIC1.91□□□□□ -2.1
RAE1P78406 RNU2-7P-201ENST00000410794 178 ntBASIC1.91□□□□□ -2.1
RAE1P78406 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
RAE1P78406 HSPE1P9-201ENST00000440046 311 ntBASIC1.91□□□□□ -2.1
RAE1P78406 SNORD11-201ENST00000459124 84 ntBASIC1.91□□□□□ -2.1
RAE1P78406 AC107393.1-201ENST00000512403 346 ntBASIC1.91□□□□□ -2.1
RAE1P78406 SNORA31.10-201ENST00000516482 106 ntBASIC1.91□□□□□ -2.1
RAE1P78406 RNA5SP481-201ENST00000516814 122 ntBASIC1.91□□□□□ -2.1
RAE1P78406 RPL23AP91-201ENST00000569211 455 ntBASIC1.91□□□□□ -2.1
RAE1P78406 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
RAE1P78406 RNU2-4P-201ENST00000606190 192 ntBASIC1.91□□□□□ -2.1
RAE1P78406 AL591926.4-201ENST00000616895 298 ntBASIC1.91□□□□□ -2.1
RAE1P78406 ZNF702P-202ENST00000434269 1966 ntBASIC1.9□□□□□ -2.1
RAE1P78406 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
RAE1P78406 ZNF658B-202ENST00000615961 3375 ntBASIC1.9□□□□□ -2.1
RAE1P78406 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
RAE1P78406 RNY3P5-201ENST00000384127 102 ntBASIC1.9□□□□□ -2.11
RAE1P78406 MIR17-201ENST00000385012 84 ntBASIC1.9□□□□□ -2.11
RAE1P78406 MT-TR-201ENST00000387439 65 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms