Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 AC127459.3-201ENST00000624328 466 ntBASIC-1.17□□□□□ -2.6
UBA52P62987 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.18□□□□□ -2.6
UBA52P62987 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.18□□□□□ -2.6
UBA52P62987 RNU6-726P-201ENST00000364680 107 ntBASIC-1.18□□□□□ -2.6
UBA52P62987 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.18□□□□□ -2.6
UBA52P62987 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.18□□□□□ -2.6
UBA52P62987 MTND2P3-201ENST00000452458 470 ntBASIC-1.18□□□□□ -2.6
UBA52P62987 RPL23AP75-201ENST00000491601 451 ntBASIC-1.18□□□□□ -2.6
UBA52P62987 AC093303.1-201ENST00000514549 295 ntBASIC-1.18□□□□□ -2.6
UBA52P62987 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.18□□□□□ -2.6
UBA52P62987 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.18□□□□□ -2.6
UBA52P62987 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 RNU6-136P-201ENST00000384663 107 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 U8.17-201ENST00000391292 132 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 MTND3P9-201ENST00000429526 346 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 SNORA25.14-201ENST00000516481 132 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 AP003168.1-201ENST00000530091 307 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 AC084368.1-201ENST00000620935 65 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 ZNF299P-201ENST00000406845 1804 ntBASIC-1.19□□□□□ -2.6
UBA52P62987 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.2□□□□□ -2.6
UBA52P62987 RNU6-291P-201ENST00000384720 107 ntBASIC-1.2□□□□□ -2.6
UBA52P62987 MT-TF-201ENST00000387314 71 ntBASIC-1.2□□□□□ -2.6
UBA52P62987 RNU4-83P-201ENST00000410863 133 ntBASIC-1.2□□□□□ -2.6
UBA52P62987 AC093023.1-201ENST00000547375 507 ntBASIC-1.2□□□□□ -2.6
UBA52P62987 AC005609.4-201ENST00000625071 447 ntBASIC-1.2□□□□□ -2.6
UBA52P62987 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.2□□□□□ -2.6
UBA52P62987 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 RNU6-24P-201ENST00000384440 107 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 RNU6-393P-201ENST00000384475 107 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 SNORD115.1-201ENST00000391109 76 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 MIR1207-201ENST00000408249 87 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 RNU6-855P-201ENST00000410395 104 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.21□□□□□ -2.6
UBA52P62987 SSR1P2-201ENST00000415208 787 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 AL354751.2-201ENST00000415471 210 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.21□□□□□ -2.6
UBA52P62987 AL512286.1-201ENST00000439244 400 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.21□□□□□ -2.6
UBA52P62987 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.21□□□□□ -2.6
UBA52P62987 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.21□□□□□ -2.6
UBA52P62987 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.21□□□□□ -2.6
UBA52P62987 snoU13.2-201ENST00000459201 104 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 AC116353.3-201ENST00000511215 249 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 AC090572.1-201ENST00000519251 160 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 MTND1P35-201ENST00000526739 508 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 AC093726.3-201ENST00000637588 150 ntBASIC-1.21□□□□□ -2.6
UBA52P62987 MTND5P17-201ENST00000418405 1603 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 Y_RNA.13-201ENST00000362403 112 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 SNORD114-3-201ENST00000364969 75 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 RNU6-47P-201ENST00000383866 107 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 AC119618.1-201ENST00000434191 222 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 AC108059.2-201ENST00000434626 151 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 RPL22P17-201ENST00000438729 315 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 RPL7P42-201ENST00000481005 679 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 AC079140.5-201ENST00000507882 310 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 RNU7-181P-201ENST00000517234 74 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.22□□□□□ -2.6
UBA52P62987 AP003181.2-201ENST00000528941 181 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 AC040926.1-201ENST00000530195 238 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 POLR3GP1-201ENST00000594073 261 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 AL359999.1-201ENST00000604513 294 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 RNU6-85P-201ENST00000605989 107 ntBASIC-1.22□□□□□ -2.6
UBA52P62987 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 RNU6-434P-201ENST00000384376 107 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 SNORD70.1-201ENST00000391007 85 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 RNU6-757P-201ENST00000410334 100 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 ELOCP4-201ENST00000420090 333 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 SNRPGP14-201ENST00000435400 219 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.23□□□□□ -2.61
UBA52P62987 SNORA25.10-201ENST00000515926 124 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.23□□□□□ -2.61
UBA52P62987 BNIP3P40-201ENST00000596017 556 ntBASIC-1.23□□□□□ -2.61
UBA52P62987 RNU6-809P-201ENST00000384461 107 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 SNORD73A-201ENST00000386062 65 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 RNU6-847P-201ENST00000411115 108 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-1.24□□□□□ -2.61
UBA52P62987 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.24□□□□□ -2.61
UBA52P62987 RNU6-881P-201ENST00000516813 102 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 AC006441.5-201ENST00000612680 209 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 MIR6082-201ENST00000613604 109 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 AL158209.2-201ENST00000619266 216 ntBASIC-1.24□□□□□ -2.61
UBA52P62987 MIR365A-201ENST00000362260 87 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 RNU4-36P-201ENST00000364294 144 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 RNU6-413P-201ENST00000384115 107 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 SNORD38C-201ENST00000384381 69 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.25□□□□□ -2.61
UBA52P62987 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms