Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AP003168.1-201ENST00000530091 307 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 MIR3682-201ENST00000581338 84 ntBASIC-0.97□□□□□ -2.56
RPS28P62857 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 SNORD50B-201ENST00000364995 70 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 RNU6-83P-201ENST00000384568 112 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-0.98□□□□□ -2.57
RPS28P62857 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.98□□□□□ -2.57
RPS28P62857 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.98□□□□□ -2.57
RPS28P62857 Y_RNA.638-201ENST00000459374 113 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 MTCO1P29-201ENST00000496868 288 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-0.98□□□□□ -2.57
RPS28P62857 AC006600.1-201ENST00000572529 153 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 MIR4677-201ENST00000584153 80 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 AC125232.2-201ENST00000592457 143 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 MIR6740-201ENST00000618268 113 ntBASIC-0.98□□□□□ -2.57
RPS28P62857 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.98□□□□□ -2.57
RPS28P62857 SNORD83B-201ENST00000386745 93 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 SNORA75.1-201ENST00000391130 148 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 U8.17-201ENST00000391292 132 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 RNU6-855P-201ENST00000410395 104 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 RNU6-138P-201ENST00000515952 107 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 SCARNA17-201ENST00000516183 144 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 RNA5SP47-201ENST00000517230 109 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.99□□□□□ -2.57
RPS28P62857 AL021368.1-201ENST00000607490 540 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 AC023510.2-201ENST00000622162 746 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 AL138960.2-201ENST00000625145 535 ntBASIC-0.99□□□□□ -2.57
RPS28P62857 Y_RNA.269-201ENST00000364685 89 ntBASIC-1□□□□□ -2.57
RPS28P62857 MIR1912-201ENST00000410389 80 ntBASIC-1□□□□□ -2.57
RPS28P62857 RNU6-195P-201ENST00000411352 109 ntBASIC-1□□□□□ -2.57
RPS28P62857 ELOCP21-201ENST00000412558 336 ntBASIC-1□□□□□ -2.57
RPS28P62857 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1□□□□□ -2.57
RPS28P62857 RNU7-73P-201ENST00000458743 63 ntBASIC-1□□□□□ -2.57
RPS28P62857 Y_RNA.205-201ENST00000364128 113 ntBASIC-1.01□□□□□ -2.57
RPS28P62857 SNORA1.2-201ENST00000365189 134 ntBASIC-1.01□□□□□ -2.57
RPS28P62857 Y_RNA.617-201ENST00000410920 90 ntBASIC-1.01□□□□□ -2.57
RPS28P62857 MTCO2P8-201ENST00000412213 658 ntBASIC-1.01□□□□□ -2.57
RPS28P62857 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.01□□□□□ -2.57
RPS28P62857 AC108676.2-201ENST00000605225 163 ntBASIC-1.01□□□□□ -2.57
RPS28P62857 SNORA70.25-201ENST00000612741 95 ntBASIC-1.01□□□□□ -2.57
RPS28P62857 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.01□□□□□ -2.57
RPS28P62857 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.01□□□□□ -2.57
RPS28P62857 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 RNU6-847P-201ENST00000411115 108 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 AC090844.1-201ENST00000422019 156 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 RNU6-758P-201ENST00000516292 89 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 Y_RNA.676-201ENST00000516393 96 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 RNA5SP66-201ENST00000517178 101 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 RNU7-181P-201ENST00000517234 74 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 CPDP1-201ENST00000579660 283 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 AC069431.2-201ENST00000604149 1099 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 U7.6-201ENST00000610841 64 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 U6.115-201ENST00000636045 103 ntBASIC-1.02□□□□□ -2.57
RPS28P62857 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.03□□□□□ -2.57
RPS28P62857 MIR101-2-201ENST00000362195 79 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 Y_RNA.32-201ENST00000362589 110 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 RNU6-456P-201ENST00000384493 107 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 MIR876-201ENST00000401147 81 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 UBE2D3P4-201ENST00000441973 436 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 SPINT5P-201ENST00000448174 155 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 IGKV1-22-201ENST00000524313 326 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 AP002963.1-201ENST00000530590 184 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 MIR4999-201ENST00000585029 91 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 AC121247.2-201ENST00000604776 136 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 AL357078.3-201ENST00000607528 618 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.03□□□□□ -2.57
RPS28P62857 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.03□□□□□ -2.57
RPS28P62857 AL162376.1-201ENST00000624117 175 ntBASIC-1.03□□□□□ -2.57
RPS28P62857 SNORD50.1-201ENST00000362987 71 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 Y_RNA.112-201ENST00000363250 102 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 RNA5SP368-201ENST00000364298 116 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 MIR588-201ENST00000384900 83 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 RNU6-903P-201ENST00000391270 109 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.04□□□□□ -2.58
RPS28P62857 UQCRBP2-201ENST00000447827 297 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.04□□□□□ -2.58
RPS28P62857 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.04□□□□□ -2.58
RPS28P62857 AC022616.4-201ENST00000522985 181 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 AC138749.4-201ENST00000563970 127 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 AC022960.3-201ENST00000619794 441 ntBASIC-1.04□□□□□ -2.58
RPS28P62857 SNRPGP10-201ENST00000432323 225 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 AC084290.1-201ENST00000434995 374 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 RNU6-830P-201ENST00000516353 107 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 RNU6-881P-201ENST00000516813 102 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 MTND4P7-201ENST00000523876 130 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 MIR378D2-201ENST00000580636 98 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 MIR4639-201ENST00000584938 69 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 AL355297.3-201ENST00000604082 446 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.05□□□□□ -2.58
RPS28P62857 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.05□□□□□ -2.58
RPS28P62857 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms