Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 Y_RNA.482-201ENST00000384377 111 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 RNU6-1237P-201ENST00000384777 107 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 RNU6-1199P-201ENST00000411249 104 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 MLLT10P1-201ENST00000418346 262 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.4□□□□□ -2.35
EIF3EP60228 AC116353.2-201ENST00000505332 712 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.4□□□□□ -2.35
EIF3EP60228 AC105313.1-201ENST00000509121 353 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 RNU6-1012P-201ENST00000516606 109 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 AC006380.1-201ENST00000603598 186 ntBASIC0.4□□□□□ -2.35
EIF3EP60228 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
EIF3EP60228 Y_RNA.453-201ENST00000384223 109 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 SNORD105-201ENST00000386910 85 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 RNU6-613P-201ENST00000410412 108 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 RNU6-994P-201ENST00000410507 111 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 MTND3P8-201ENST00000412909 339 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 MTND4P28-201ENST00000426217 387 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.39□□□□□ -2.35
EIF3EP60228 U8.19-201ENST00000459095 133 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 AC087588.2-201ENST00000617667 426 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 AC008133.2-201ENST00000624540 351 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.39□□□□□ -2.35
EIF3EP60228 MIR4251-201ENST00000635819 61 ntBASIC0.39□□□□□ -2.35
EIF3EP60228 Y_RNA.3-201ENST00000362331 103 ntBASIC0.38□□□□□ -2.35
EIF3EP60228 Y_RNA.88-201ENST00000363029 99 ntBASIC0.38□□□□□ -2.35
EIF3EP60228 SNORA72-201ENST00000384339 132 ntBASIC0.38□□□□□ -2.35
EIF3EP60228 RNU6-131P-201ENST00000391144 107 ntBASIC0.38□□□□□ -2.35
EIF3EP60228 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.38□□□□□ -2.35
EIF3EP60228 AC107399.1-201ENST00000451226 265 ntBASIC0.38□□□□□ -2.35
EIF3EP60228 MIR2053-201ENST00000459295 91 ntBASIC0.38□□□□□ -2.35
EIF3EP60228 AC005972.2-201ENST00000604690 348 ntBASIC0.38□□□□□ -2.35
EIF3EP60228 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
EIF3EP60228 RNU6-99P-201ENST00000364721 107 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 Y_RNA.368-201ENST00000365547 113 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 Y_RNA.436-201ENST00000384097 102 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 Y_RNA.516-201ENST00000384541 124 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 SNORD115-47-201ENST00000391226 86 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 SNRPGP10-201ENST00000432323 225 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 CHEK2P4-201ENST00000450340 246 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 AC093534.1-201ENST00000504977 132 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 RNU6-436P-201ENST00000516171 114 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 RNU6-307P-201ENST00000516743 106 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.37□□□□□ -2.35
EIF3EP60228 MIR548AR-201ENST00000582191 57 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
EIF3EP60228 AC027514.1-201ENST00000588561 1603 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 Y_RNA.86-201ENST00000363020 111 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 RNY1P8-201ENST00000383970 114 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 SNORD28B-201ENST00000390993 75 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 SNORA75.4-201ENST00000391278 119 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 Y_RNA.592-201ENST00000410274 109 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 RNA5SP222-201ENST00000411039 105 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 RNU6-177P-201ENST00000411257 104 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 RNU6-966P-201ENST00000516479 104 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 AC093027.1-201ENST00000546698 429 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 AL355375.2-201ENST00000574825 175 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 AC104695.3-201ENST00000604052 296 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 RBM11P1-201ENST00000604951 799 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 AC080013.6-201ENST00000606185 215 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
EIF3EP60228 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
EIF3EP60228 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
EIF3EP60228 RNU6-369P-201ENST00000362515 102 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 Y_RNA.168-201ENST00000363740 102 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 RNU6-926P-201ENST00000384075 107 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 SNORA2B-201ENST00000384583 137 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 RNA5SP95-201ENST00000410319 137 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 AC016907.1-201ENST00000419483 435 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 FCF1P4-201ENST00000448326 183 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.35□□□□□ -2.35
EIF3EP60228 PISRT1.1-201ENST00000616930 107 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 AC091925.1-201ENST00000623204 462 ntBASIC0.35□□□□□ -2.35
EIF3EP60228 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
EIF3EP60228 MIR1-1-201ENST00000362147 71 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 Y_RNA.148-201ENST00000363557 117 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 Y_RNA.370-201ENST00000365589 108 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 Y_RNA.446-201ENST00000384178 104 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 RNY3P4-201ENST00000384428 101 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 Y_RNA.577-201ENST00000384794 101 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 MIR499A-201ENST00000384903 122 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 SNORA69.1-201ENST00000390904 137 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 MTCO2P27-201ENST00000420740 428 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.34□□□□□ -2.36
EIF3EP60228 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.34□□□□□ -2.36
EIF3EP60228 MIR2115-201ENST00000516657 100 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 Y_RNA.714-201ENST00000517065 90 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 AC005176.2-201ENST00000596933 147 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 AL355073.2-201ENST00000612106 557 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 MIR6513-201ENST00000621188 64 ntBASIC0.34□□□□□ -2.36
EIF3EP60228 RNU6-623P-201ENST00000363143 105 ntBASIC0.33□□□□□ -2.36
EIF3EP60228 Y_RNA.146-201ENST00000363549 102 ntBASIC0.33□□□□□ -2.36
EIF3EP60228 SNORA36.2-201ENST00000384004 127 ntBASIC0.33□□□□□ -2.36
EIF3EP60228 RNU6-20P-201ENST00000384106 107 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms