Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 GHRLOS.1-201ENST00000610995 70 ntBASIC1.72□□□□□ -2.13
RHBDL3P58872 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.71□□□□□ -2.14
RHBDL3P58872 Y_RNA.61-201ENST00000362835 102 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 Y_RNA.128-201ENST00000363391 112 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 U8.5-201ENST00000364528 136 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 Y_RNA.368-201ENST00000365547 113 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.71□□□□□ -2.14
RHBDL3P58872 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 RNU6-1323P-201ENST00000384025 107 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 MIR320A-201ENST00000385302 82 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 Z98949.2-201ENST00000440996 144 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 Y_RNA.631-201ENST00000459607 101 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 AC124312.5-201ENST00000604451 268 ntBASIC1.71□□□□□ -2.14
RHBDL3P58872 MIRLET7C-201ENST00000362160 84 ntBASIC1.7□□□□□ -2.14
RHBDL3P58872 Y_RNA.28-201ENST00000362554 111 ntBASIC1.7□□□□□ -2.14
RHBDL3P58872 Y_RNA.143-201ENST00000363520 106 ntBASIC1.7□□□□□ -2.14
RHBDL3P58872 MIR499A-201ENST00000384903 122 ntBASIC1.7□□□□□ -2.14
RHBDL3P58872 MIR4762-201ENST00000585261 75 ntBASIC1.7□□□□□ -2.14
RHBDL3P58872 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.7□□□□□ -2.14
RHBDL3P58872 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
RHBDL3P58872 RNU6-937P-201ENST00000384325 106 ntBASIC1.69□□□□□ -2.14
RHBDL3P58872 MIR452-201ENST00000385020 85 ntBASIC1.69□□□□□ -2.14
RHBDL3P58872 RNU6-101P-201ENST00000410323 104 ntBASIC1.69□□□□□ -2.14
RHBDL3P58872 RNU6-966P-201ENST00000516479 104 ntBASIC1.69□□□□□ -2.14
RHBDL3P58872 RNU6-922P-201ENST00000516753 99 ntBASIC1.69□□□□□ -2.14
RHBDL3P58872 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.69□□□□□ -2.14
RHBDL3P58872 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RHBDL3P58872 U8.1-201ENST00000362843 134 ntBASIC1.68□□□□□ -2.14
RHBDL3P58872 RNA5SP363-201ENST00000365072 115 ntBASIC1.68□□□□□ -2.14
RHBDL3P58872 Y_RNA.535-201ENST00000384612 99 ntBASIC1.68□□□□□ -2.14
RHBDL3P58872 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.68□□□□□ -2.14
RHBDL3P58872 POLR2KP2-201ENST00000438155 177 ntBASIC1.68□□□□□ -2.14
RHBDL3P58872 RPL39P39-201ENST00000455840 151 ntBASIC1.68□□□□□ -2.14
RHBDL3P58872 AL591926.4-201ENST00000616895 298 ntBASIC1.68□□□□□ -2.14
RHBDL3P58872 AC007742.2-201ENST00000618226 398 ntBASIC1.68□□□□□ -2.14
RHBDL3P58872 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
RHBDL3P58872 SNORA25.8-201ENST00000364831 128 ntBASIC1.67□□□□□ -2.14
RHBDL3P58872 Y_RNA.310-201ENST00000365063 113 ntBASIC1.67□□□□□ -2.14
RHBDL3P58872 MIR150-201ENST00000385048 84 ntBASIC1.67□□□□□ -2.14
RHBDL3P58872 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.67□□□□□ -2.14
RHBDL3P58872 RNU1-92P-201ENST00000517017 135 ntBASIC1.67□□□□□ -2.14
RHBDL3P58872 DEFB117-201ENST00000602356 141 ntBASIC1.67□□□□□ -2.14
RHBDL3P58872 AC134503.1-201ENST00000633048 54 ntBASIC1.67□□□□□ -2.14
RHBDL3P58872 AC068647.2-201ENST00000637380 353 ntBASIC1.67□□□□□ -2.14
RHBDL3P58872 Y_RNA.183-201ENST00000363882 113 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 Y_RNA.813-201ENST00000364639 102 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 SNORA25.9-201ENST00000365087 128 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 Y_RNA.604-201ENST00000410574 102 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 PMCHL1-202ENST00000423102 261 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 HMGN2P32-201ENST00000444648 269 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 AC093850.1-201ENST00000454121 251 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 HMGN1P10-201ENST00000474557 553 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 HMGN1P7-201ENST00000491722 313 ntBASIC1.66□□□□□ -2.14
RHBDL3P58872 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RHBDL3P58872 SNORD81.1-201ENST00000363064 77 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 RNU6-797P-201ENST00000363101 109 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 Y_RNA.172-201ENST00000363765 102 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 Y_RNA.253-201ENST00000364562 112 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 Y_RNA.380-201ENST00000365663 111 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 RPS29P29-201ENST00000456396 171 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 RNU6-917P-201ENST00000516294 104 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 Y_RNA.715-201ENST00000517082 110 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 POLR3GP1-201ENST00000594073 261 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 MIR376A1-201ENST00000616574 68 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 AL353770.2-201ENST00000620024 78 ntBASIC1.65□□□□□ -2.15
RHBDL3P58872 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RHBDL3P58872 RNU6-53P-201ENST00000365367 106 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 Y_RNA.389-201ENST00000383924 113 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 MIR15B-201ENST00000385045 98 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 RNU6-308P-201ENST00000390957 107 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 MIR1276-201ENST00000408707 83 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 MIR1252-201ENST00000408861 65 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 RNU4-30P-201ENST00000410245 143 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 AC004223.1-201ENST00000479840 271 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 SNORA31.4-201ENST00000516049 129 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 PART1_1.1-201ENST00000611761 217 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.64□□□□□ -2.15
RHBDL3P58872 MIR26B-201ENST00000362251 77 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 RNU6-1084P-201ENST00000362498 107 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 Y_RNA.31-201ENST00000362574 102 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 Y_RNA.148-201ENST00000363557 117 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 snoU2-30.1-201ENST00000365012 70 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 Y_RNA.383-201ENST00000383855 97 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 RNU6-131P-201ENST00000391144 107 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.63□□□□□ -2.15
RHBDL3P58872 SNRPGP13-201ENST00000442212 177 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 MTND4LP30-201ENST00000454092 297 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 AC114811.1-201ENST00000507207 168 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 AC019288.1-201ENST00000557918 224 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 AC087685.1-201ENST00000587507 141 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 AP003357.1-201ENST00000604497 148 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 AL157834.3-201ENST00000615543 103 ntBASIC1.63□□□□□ -2.15
RHBDL3P58872 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
RHBDL3P58872 RNU6-939P-201ENST00000384634 107 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 MIR522-201ENST00000385071 87 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 RNU6-823P-201ENST00000391042 103 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 MIR548P-201ENST00000408336 84 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 RNU6-955P-201ENST00000410497 104 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 RNU6-130P-201ENST00000411112 103 ntBASIC1.62□□□□□ -2.15
RHBDL3P58872 PIGPP3-201ENST00000425307 415 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms