Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC090617.10-201ENST00000624308 134 ntBASIC0.29□□□□□ -2.36
CLDN6P56747 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.29□□□□□ -2.36
CLDN6P56747 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.29□□□□□ -2.36
CLDN6P56747 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CLDN6P56747 Y_RNA.274-201ENST00000364714 101 ntBASIC0.28□□□□□ -2.36
CLDN6P56747 RNA5SP95-201ENST00000410319 137 ntBASIC0.28□□□□□ -2.36
CLDN6P56747 MTND1P4-201ENST00000435196 415 ntBASIC0.28□□□□□ -2.36
CLDN6P56747 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.28□□□□□ -2.36
CLDN6P56747 AL392103.1-201ENST00000447000 198 ntBASIC0.28□□□□□ -2.36
CLDN6P56747 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.28□□□□□ -2.36
CLDN6P56747 RNU6-864P-201ENST00000516256 108 ntBASIC0.28□□□□□ -2.36
CLDN6P56747 MIR4251-201ENST00000635819 61 ntBASIC0.28□□□□□ -2.36
CLDN6P56747 MIR1321-201ENST00000637766 79 ntBASIC0.28□□□□□ -2.36
CLDN6P56747 Y_RNA.253-201ENST00000364562 112 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 SNORD116-9-201ENST00000384000 95 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 SNORD116-3-201ENST00000384287 95 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 SNORD116-7-201ENST00000384404 95 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 SNORD116-5-201ENST00000384462 95 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 MIR522-201ENST00000385071 87 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.27□□□□□ -2.37
CLDN6P56747 U8.22-201ENST00000459141 133 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.27□□□□□ -2.37
CLDN6P56747 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 RNU6-1088P-201ENST00000516850 104 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 MIR3662-201ENST00000637030 95 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 AC024614.3-201ENST00000637860 256 ntBASIC0.27□□□□□ -2.37
CLDN6P56747 RNU6-874P-201ENST00000362390 105 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 snoU2-30.1-201ENST00000365012 70 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 RNU6-1310P-201ENST00000384153 107 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 RNU6-1013P-201ENST00000384180 107 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 MIR1302-7-201ENST00000408841 72 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 RNU6-373P-201ENST00000411247 98 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 RNU6-177P-201ENST00000411257 104 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.26□□□□□ -2.37
CLDN6P56747 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.26□□□□□ -2.37
CLDN6P56747 HMGN2P32-201ENST00000444648 269 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 SNORD5.1-201ENST00000458800 75 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 AC104695.3-201ENST00000604052 296 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 AC005014.2-201ENST00000607795 599 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 AL355073.2-201ENST00000612106 557 ntBASIC0.26□□□□□ -2.37
CLDN6P56747 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 SNORD115-30-201ENST00000364117 82 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 Y_RNA.358-201ENST00000365491 99 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 Y_RNA.361-201ENST00000365515 120 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.25□□□□□ -2.37
CLDN6P56747 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.25□□□□□ -2.37
CLDN6P56747 MTND1P1-201ENST00000445453 368 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 MTND1P17-201ENST00000448961 204 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.25□□□□□ -2.37
CLDN6P56747 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.25□□□□□ -2.37
CLDN6P56747 RNU6-566P-201ENST00000516790 107 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 RNU6-1314P-201ENST00000517139 104 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 AC105029.1-201ENST00000520250 669 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 AC012433.1-201ENST00000588916 398 ntBASIC0.25□□□□□ -2.37
CLDN6P56747 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.25□□□□□ -2.37
CLDN6P56747 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CLDN6P56747 RNU6-1090P-201ENST00000364065 94 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 RNU6-318P-201ENST00000384283 103 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 MIR573-201ENST00000384964 99 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 RNU6-613P-201ENST00000410412 108 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 AC009161.1-201ENST00000417306 376 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 MIR2115-201ENST00000516657 100 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 AC022616.4-201ENST00000522985 181 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 AC245008.1-201ENST00000608123 476 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 MIR6759-201ENST00000638110 65 ntBASIC0.24□□□□□ -2.37
CLDN6P56747 RNU6-131P-201ENST00000391144 107 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 SNORD12B-201ENST00000410433 91 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 RNU2-16P-201ENST00000410712 136 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 AL139396.1-201ENST00000421137 167 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 AL353997.1-201ENST00000432936 108 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 SNORA25.10-201ENST00000515926 124 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 MTND2P38-201ENST00000522536 667 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 MIR4790-201ENST00000577799 79 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 MIR4802-201ENST00000581881 80 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 MIR6086-201ENST00000638065 55 ntBASIC0.23□□□□□ -2.37
CLDN6P56747 SNORD50B-201ENST00000364995 70 ntBASIC0.22□□□□□ -2.37
CLDN6P56747 Y_RNA.473-201ENST00000384333 102 ntBASIC0.22□□□□□ -2.37
CLDN6P56747 RNU6-831P-201ENST00000384548 107 ntBASIC0.22□□□□□ -2.37
CLDN6P56747 Y_RNA.688-201ENST00000516565 95 ntBASIC0.22□□□□□ -2.37
CLDN6P56747 RNU2-12P-201ENST00000517216 168 ntBASIC0.22□□□□□ -2.37
CLDN6P56747 MIR4636-201ENST00000582271 80 ntBASIC0.22□□□□□ -2.37
CLDN6P56747 AC004467.1-201ENST00000615678 330 ntBASIC0.22□□□□□ -2.37
CLDN6P56747 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 Y_RNA.2-201ENST00000362330 96 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 Y_RNA.148-201ENST00000363557 117 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 Y_RNA.168-201ENST00000363740 102 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 AL031003.1-201ENST00000404229 172 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.21□□□□□ -2.38
CLDN6P56747 RNU6-329P-201ENST00000459618 107 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.21□□□□□ -2.38
CLDN6P56747 RNU6-408P-201ENST00000515910 100 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 RNU6-314P-201ENST00000516574 104 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.21□□□□□ -2.38
CLDN6P56747 AC109635.3-201ENST00000529536 185 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.21□□□□□ -2.38
CLDN6P56747 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
CLDN6P56747 AC006380.1-201ENST00000603598 186 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms