Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 Y_RNA.496-201ENST00000384444 101 ntBASIC0.93□□□□□ -2.26
LIM2P55344 RNU6-136P-201ENST00000384663 107 ntBASIC0.93□□□□□ -2.26
LIM2P55344 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
LIM2P55344 AL160004.2-201ENST00000432935 350 ntBASIC0.93□□□□□ -2.26
LIM2P55344 AC245047.7-201ENST00000440265 293 ntBASIC0.93□□□□□ -2.26
LIM2P55344 HMGN2P32-201ENST00000444648 269 ntBASIC0.93□□□□□ -2.26
LIM2P55344 RPS20P10-201ENST00000451209 253 ntBASIC0.93□□□□□ -2.26
LIM2P55344 LINC01399-202ENST00000458450 244 ntBASIC0.93□□□□□ -2.26
LIM2P55344 RNU4-77P-201ENST00000516692 156 ntBASIC0.93□□□□□ -2.26
LIM2P55344 Y_RNA.714-201ENST00000517065 90 ntBASIC0.93□□□□□ -2.26
LIM2P55344 RNA5SP404-201ENST00000517118 132 ntBASIC0.93□□□□□ -2.26
LIM2P55344 MIR5188-201ENST00000583467 113 ntBASIC0.93□□□□□ -2.26
LIM2P55344 BX284668.6-201ENST00000606899 438 ntBASIC0.93□□□□□ -2.26
LIM2P55344 AL591926.4-201ENST00000616895 298 ntBASIC0.93□□□□□ -2.26
LIM2P55344 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
LIM2P55344 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.93□□□□□ -2.26
LIM2P55344 RNU4-50P-201ENST00000364361 141 ntBASIC0.92□□□□□ -2.26
LIM2P55344 Y_RNA.336-201ENST00000365307 109 ntBASIC0.92□□□□□ -2.26
LIM2P55344 Y_RNA.368-201ENST00000365547 113 ntBASIC0.92□□□□□ -2.26
LIM2P55344 Y_RNA.431-201ENST00000384086 102 ntBASIC0.92□□□□□ -2.26
LIM2P55344 RNU6-708P-201ENST00000384217 107 ntBASIC0.92□□□□□ -2.26
LIM2P55344 RNY3P14-201ENST00000384309 102 ntBASIC0.92□□□□□ -2.26
LIM2P55344 RNU6-163P-201ENST00000384396 106 ntBASIC0.92□□□□□ -2.26
LIM2P55344 AC096644.2-201ENST00000429278 159 ntBASIC0.92□□□□□ -2.26
LIM2P55344 DYNLT3P2-201ENST00000442517 295 ntBASIC0.92□□□□□ -2.26
LIM2P55344 SNORA31.2-201ENST00000516019 134 ntBASIC0.92□□□□□ -2.26
LIM2P55344 AC007742.2-201ENST00000618226 398 ntBASIC0.92□□□□□ -2.26
LIM2P55344 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.92□□□□□ -2.26
LIM2P55344 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
LIM2P55344 SNORD68-201ENST00000363214 84 ntBASIC0.91□□□□□ -2.26
LIM2P55344 Y_RNA.164-201ENST00000363709 102 ntBASIC0.91□□□□□ -2.26
LIM2P55344 Y_RNA.197-201ENST00000364004 102 ntBASIC0.91□□□□□ -2.26
LIM2P55344 Y_RNA.253-201ENST00000364562 112 ntBASIC0.91□□□□□ -2.26
LIM2P55344 Y_RNA.329-201ENST00000365209 107 ntBASIC0.91□□□□□ -2.26
LIM2P55344 AC117470.1-201ENST00000381974 330 ntBASIC0.91□□□□□ -2.26
LIM2P55344 RNU6-1080P-201ENST00000383982 107 ntBASIC0.91□□□□□ -2.26
LIM2P55344 Y_RNA.458-201ENST00000384240 102 ntBASIC0.91□□□□□ -2.26
LIM2P55344 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.91□□□□□ -2.26
LIM2P55344 Y_RNA.621-201ENST00000411065 96 ntBASIC0.91□□□□□ -2.26
LIM2P55344 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.91□□□□□ -2.26
LIM2P55344 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.91□□□□□ -2.26
LIM2P55344 AC093850.1-201ENST00000454121 251 ntBASIC0.91□□□□□ -2.26
LIM2P55344 U8.20-201ENST00000459445 131 ntBASIC0.91□□□□□ -2.26
LIM2P55344 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.91□□□□□ -2.26
LIM2P55344 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.91□□□□□ -2.26
LIM2P55344 AC087685.1-201ENST00000587507 141 ntBASIC0.91□□□□□ -2.26
LIM2P55344 AC012676.2-201ENST00000619258 186 ntBASIC0.91□□□□□ -2.26
LIM2P55344 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LIM2P55344 AL442644.1-201ENST00000454390 3105 ntBASIC0.91□□□□□ -2.26
LIM2P55344 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LIM2P55344 SNORD114-27-201ENST00000363766 70 ntBASIC0.9□□□□□ -2.27
LIM2P55344 Y_RNA.395-201ENST00000383945 109 ntBASIC0.9□□□□□ -2.27
LIM2P55344 Y_RNA.551-201ENST00000384661 102 ntBASIC0.9□□□□□ -2.27
LIM2P55344 MIR522-201ENST00000385071 87 ntBASIC0.9□□□□□ -2.27
LIM2P55344 RNU6-507P-201ENST00000516045 100 ntBASIC0.9□□□□□ -2.27
LIM2P55344 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
LIM2P55344 AC093027.1-201ENST00000546698 429 ntBASIC0.9□□□□□ -2.27
LIM2P55344 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.9□□□□□ -2.27
LIM2P55344 HSPE1P19-201ENST00000603327 295 ntBASIC0.9□□□□□ -2.27
LIM2P55344 AC011373.1-201ENST00000607270 237 ntBASIC0.9□□□□□ -2.27
LIM2P55344 AC112487.2-201ENST00000637950 304 ntBASIC0.9□□□□□ -2.27
LIM2P55344 Y_RNA.310-201ENST00000365063 113 ntBASIC0.89□□□□□ -2.27
LIM2P55344 SNORA25.9-201ENST00000365087 128 ntBASIC0.89□□□□□ -2.27
LIM2P55344 Y_RNA.331-201ENST00000365267 102 ntBASIC0.89□□□□□ -2.27
LIM2P55344 Y_RNA.439-201ENST00000384119 94 ntBASIC0.89□□□□□ -2.27
LIM2P55344 SNORA80D-201ENST00000384488 135 ntBASIC0.89□□□□□ -2.27
LIM2P55344 MIR526A1-201ENST00000384897 85 ntBASIC0.89□□□□□ -2.27
LIM2P55344 RNU6-1248P-201ENST00000391096 64 ntBASIC0.89□□□□□ -2.27
LIM2P55344 MIR1302-11-201ENST00000408051 138 ntBASIC0.89□□□□□ -2.27
LIM2P55344 MIR1302-9-201ENST00000408365 138 ntBASIC0.89□□□□□ -2.27
LIM2P55344 MIR1302-10-201ENST00000408734 138 ntBASIC0.89□□□□□ -2.27
LIM2P55344 RNU6-855P-201ENST00000410395 104 ntBASIC0.89□□□□□ -2.27
LIM2P55344 AC022028.1-201ENST00000412054 408 ntBASIC0.89□□□□□ -2.27
LIM2P55344 AC104332.1-201ENST00000440471 797 ntBASIC0.89□□□□□ -2.27
LIM2P55344 RPEP5-201ENST00000441137 268 ntBASIC0.89□□□□□ -2.27
LIM2P55344 OR2A41P-201ENST00000473586 105 ntBASIC0.89□□□□□ -2.27
LIM2P55344 AC048334.1-201ENST00000477975 159 ntBASIC0.89□□□□□ -2.27
LIM2P55344 AC114811.1-201ENST00000507207 168 ntBASIC0.89□□□□□ -2.27
LIM2P55344 RNU6-1170P-201ENST00000515974 106 ntBASIC0.89□□□□□ -2.27
LIM2P55344 Y_RNA.661-201ENST00000516003 99 ntBASIC0.89□□□□□ -2.27
LIM2P55344 SNORD79.1-201ENST00000516069 84 ntBASIC0.89□□□□□ -2.27
LIM2P55344 SNORD111.1-201ENST00000516421 86 ntBASIC0.89□□□□□ -2.27
LIM2P55344 RNU6-966P-201ENST00000516479 104 ntBASIC0.89□□□□□ -2.27
LIM2P55344 RNA5SP102-201ENST00000516865 106 ntBASIC0.89□□□□□ -2.27
LIM2P55344 AP003357.1-201ENST00000604497 148 ntBASIC0.89□□□□□ -2.27
LIM2P55344 AL133255.1-201ENST00000606374 441 ntBASIC0.89□□□□□ -2.27
LIM2P55344 MIR1302-2-201ENST00000607096 138 ntBASIC0.89□□□□□ -2.27
LIM2P55344 SNORD58B-201ENST00000607313 66 ntBASIC0.89□□□□□ -2.27
LIM2P55344 RNU4-73P-201ENST00000363164 141 ntBASIC0.88□□□□□ -2.27
LIM2P55344 snoU2-30.1-201ENST00000365012 70 ntBASIC0.88□□□□□ -2.27
LIM2P55344 Y_RNA.341-201ENST00000365341 102 ntBASIC0.88□□□□□ -2.27
LIM2P55344 SNORA63.7-201ENST00000365579 123 ntBASIC0.88□□□□□ -2.27
LIM2P55344 SNORA22-201ENST00000383907 134 ntBASIC0.88□□□□□ -2.27
LIM2P55344 SNORA22C-201ENST00000384614 134 ntBASIC0.88□□□□□ -2.27
LIM2P55344 MIR222-201ENST00000384992 110 ntBASIC0.88□□□□□ -2.27
LIM2P55344 RNU6-910P-201ENST00000390844 107 ntBASIC0.88□□□□□ -2.27
LIM2P55344 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.88□□□□□ -2.27
LIM2P55344 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.88□□□□□ -2.27
LIM2P55344 SNORA25.10-201ENST00000515926 124 ntBASIC0.88□□□□□ -2.27
LIM2P55344 FAM106DP-201ENST00000586416 501 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms