Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU6-1213P-201ENST00000517075 94 ntBASIC0.49□□□□□ -2.33
CDH6P55285 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
CDH6P55285 Y_RNA.101-201ENST00000363154 102 ntBASIC0.48□□□□□ -2.33
CDH6P55285 Y_RNA.116-201ENST00000363292 103 ntBASIC0.48□□□□□ -2.33
CDH6P55285 RNU6-324P-201ENST00000363957 106 ntBASIC0.48□□□□□ -2.33
CDH6P55285 RNU1-133P-201ENST00000364867 167 ntBASIC0.48□□□□□ -2.33
CDH6P55285 Y_RNA.339-201ENST00000365325 102 ntBASIC0.48□□□□□ -2.33
CDH6P55285 SNORA75.4-201ENST00000391278 119 ntBASIC0.48□□□□□ -2.33
CDH6P55285 MRPS18CP6-201ENST00000423587 223 ntBASIC0.48□□□□□ -2.33
CDH6P55285 RNU7-43P-201ENST00000516554 64 ntBASIC0.48□□□□□ -2.33
CDH6P55285 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
CDH6P55285 RNU6-307P-201ENST00000516743 106 ntBASIC0.48□□□□□ -2.33
CDH6P55285 MIR2355-201ENST00000517199 87 ntBASIC0.48□□□□□ -2.33
CDH6P55285 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.48□□□□□ -2.33
CDH6P55285 snoU2-30.1-201ENST00000365012 70 ntBASIC0.47□□□□□ -2.33
CDH6P55285 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
CDH6P55285 RNY1P14-201ENST00000384426 108 ntBASIC0.47□□□□□ -2.33
CDH6P55285 RNU6-1215P-201ENST00000384441 102 ntBASIC0.47□□□□□ -2.33
CDH6P55285 RNU6-1067P-201ENST00000384752 107 ntBASIC0.47□□□□□ -2.33
CDH6P55285 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CDH6P55285 MTND4P28-201ENST00000426217 387 ntBASIC0.47□□□□□ -2.33
CDH6P55285 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.47□□□□□ -2.33
CDH6P55285 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
CDH6P55285 RPL30P15-201ENST00000457129 321 ntBASIC0.47□□□□□ -2.33
CDH6P55285 SNORD123-201ENST00000459473 70 ntBASIC0.47□□□□□ -2.33
CDH6P55285 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH6P55285 RNU6-120P-201ENST00000516077 103 ntBASIC0.47□□□□□ -2.33
CDH6P55285 RNU11-2P-201ENST00000516898 142 ntBASIC0.47□□□□□ -2.33
CDH6P55285 AC022616.4-201ENST00000522985 181 ntBASIC0.47□□□□□ -2.33
CDH6P55285 AC036111.3-201ENST00000526389 112 ntBASIC0.47□□□□□ -2.33
CDH6P55285 AC093027.1-201ENST00000546698 429 ntBASIC0.47□□□□□ -2.33
CDH6P55285 Z83818.1-201ENST00000603584 150 ntBASIC0.47□□□□□ -2.33
CDH6P55285 AC240442.1-201ENST00000616055 283 ntBASIC0.47□□□□□ -2.33
CDH6P55285 MIR6513-201ENST00000621188 64 ntBASIC0.47□□□□□ -2.33
CDH6P55285 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH6P55285 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CDH6P55285 SNORD18A-201ENST00000363753 72 ntBASIC0.46□□□□□ -2.34
CDH6P55285 RNU6-654P-201ENST00000364373 107 ntBASIC0.46□□□□□ -2.34
CDH6P55285 Y_RNA.318-201ENST00000365131 97 ntBASIC0.46□□□□□ -2.34
CDH6P55285 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
CDH6P55285 RNU6-42P-201ENST00000384165 107 ntBASIC0.46□□□□□ -2.34
CDH6P55285 SNORA69.1-201ENST00000390904 137 ntBASIC0.46□□□□□ -2.34
CDH6P55285 RNU6-131P-201ENST00000391144 107 ntBASIC0.46□□□□□ -2.34
CDH6P55285 SNORD111-201ENST00000408139 94 ntBASIC0.46□□□□□ -2.34
CDH6P55285 MIR1277-201ENST00000408536 78 ntBASIC0.46□□□□□ -2.34
CDH6P55285 RNU2-54P-201ENST00000410299 190 ntBASIC0.46□□□□□ -2.34
CDH6P55285 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.46□□□□□ -2.34
CDH6P55285 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.46□□□□□ -2.34
CDH6P55285 AF235103.2-201ENST00000525753 346 ntBASIC0.46□□□□□ -2.34
CDH6P55285 AC011195.1-201ENST00000578177 177 ntBASIC0.46□□□□□ -2.34
CDH6P55285 MIR6734-201ENST00000621166 68 ntBASIC0.46□□□□□ -2.34
CDH6P55285 AL669831.3-213ENST00000636676 183 ntBASIC0.46□□□□□ -2.34
CDH6P55285 SNORD50B-201ENST00000364995 70 ntBASIC0.45□□□□□ -2.34
CDH6P55285 MIR625-201ENST00000385047 85 ntBASIC0.45□□□□□ -2.34
CDH6P55285 MIR518E-201ENST00000385252 88 ntBASIC0.45□□□□□ -2.34
CDH6P55285 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
CDH6P55285 Y_RNA.592-201ENST00000410274 109 ntBASIC0.45□□□□□ -2.34
CDH6P55285 RNA5SP95-201ENST00000410319 137 ntBASIC0.45□□□□□ -2.34
CDH6P55285 RNU2-61P-201ENST00000411069 191 ntBASIC0.45□□□□□ -2.34
CDH6P55285 RNU6-1304P-201ENST00000411374 106 ntBASIC0.45□□□□□ -2.34
CDH6P55285 HMGN2P32-201ENST00000444648 269 ntBASIC0.45□□□□□ -2.34
CDH6P55285 FCF1P4-201ENST00000448326 183 ntBASIC0.45□□□□□ -2.34
CDH6P55285 CHEK2P4-201ENST00000450340 246 ntBASIC0.45□□□□□ -2.34
CDH6P55285 AC116353.2-201ENST00000505332 712 ntBASIC0.45□□□□□ -2.34
CDH6P55285 AC011352.1-201ENST00000512300 793 ntBASIC0.45□□□□□ -2.34
CDH6P55285 RNU6-155P-201ENST00000516347 100 ntBASIC0.45□□□□□ -2.34
CDH6P55285 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.45□□□□□ -2.34
CDH6P55285 SNORA4-201ENST00000584302 138 ntBASIC0.45□□□□□ -2.34
CDH6P55285 AC005176.2-201ENST00000596933 147 ntBASIC0.45□□□□□ -2.34
CDH6P55285 AC087588.2-201ENST00000617667 426 ntBASIC0.45□□□□□ -2.34
CDH6P55285 AC134026.1-201ENST00000623249 2239 ntBASIC0.45□□□□□ -2.34
CDH6P55285 Y_RNA.122-201ENST00000363331 96 ntBASIC0.44□□□□□ -2.34
CDH6P55285 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
CDH6P55285 AC244098.3-201ENST00000424803 96 ntBASIC0.44□□□□□ -2.34
CDH6P55285 SNRPGP10-201ENST00000432323 225 ntBASIC0.44□□□□□ -2.34
CDH6P55285 AC069439.1-201ENST00000494739 167 ntBASIC0.44□□□□□ -2.34
CDH6P55285 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.44□□□□□ -2.34
CDH6P55285 MIR4300-201ENST00000581016 96 ntBASIC0.44□□□□□ -2.34
CDH6P55285 AC005972.2-201ENST00000604690 348 ntBASIC0.44□□□□□ -2.34
CDH6P55285 RMST_2.1-201ENST00000617263 136 ntBASIC0.44□□□□□ -2.34
CDH6P55285 AC008133.2-201ENST00000624540 351 ntBASIC0.44□□□□□ -2.34
CDH6P55285 MIR4251-201ENST00000635819 61 ntBASIC0.44□□□□□ -2.34
CDH6P55285 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.44□□□□□ -2.34
CDH6P55285 Y_RNA.148-201ENST00000363557 117 ntBASIC0.43□□□□□ -2.34
CDH6P55285 Y_RNA.269-201ENST00000364685 89 ntBASIC0.43□□□□□ -2.34
CDH6P55285 SNORA36.2-201ENST00000384004 127 ntBASIC0.43□□□□□ -2.34
CDH6P55285 SNORA2B-201ENST00000384583 137 ntBASIC0.43□□□□□ -2.34
CDH6P55285 MIR1302-7-201ENST00000408841 72 ntBASIC0.43□□□□□ -2.34
CDH6P55285 AC005534.2-201ENST00000431047 433 ntBASIC0.43□□□□□ -2.34
CDH6P55285 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.43□□□□□ -2.34
CDH6P55285 MTND4P17-201ENST00000470444 350 ntBASIC0.43□□□□□ -2.34
CDH6P55285 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.43□□□□□ -2.34
CDH6P55285 RNU6-966P-201ENST00000516479 104 ntBASIC0.43□□□□□ -2.34
CDH6P55285 RNU6-1012P-201ENST00000516606 109 ntBASIC0.43□□□□□ -2.34
CDH6P55285 AC012433.1-201ENST00000588916 398 ntBASIC0.43□□□□□ -2.34
CDH6P55285 AC011712.1-201ENST00000588959 234 ntBASIC0.43□□□□□ -2.34
CDH6P55285 AC011476.5-201ENST00000615594 130 ntBASIC0.43□□□□□ -2.34
CDH6P55285 AC022709.1-201ENST00000615967 87 ntBASIC0.43□□□□□ -2.34
CDH6P55285 AC002553.4-201ENST00000616896 331 ntBASIC0.43□□□□□ -2.34
CDH6P55285 MIR6516-201ENST00000630554 81 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms