Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SNORA36.1-201ENST00000363424 132 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MIR522-201ENST00000385071 87 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MIR760-201ENST00000390220 80 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 SNORD28B-201ENST00000390993 75 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 U8.17-201ENST00000391292 132 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MCFD2P1-201ENST00000417812 300 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MTATP6P18-201ENST00000417994 673 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AC133104.1-201ENST00000429100 218 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MTCO2P11-201ENST00000431069 680 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MTND1P17-201ENST00000448961 204 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AC005042.3-201ENST00000453230 174 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 MTCO2P30-201ENST00000503662 364 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AC010486.3-201ENST00000511602 785 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 SNORA19.2-201ENST00000516013 114 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AC022616.4-201ENST00000522985 181 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.45□□□□□ -2.48
NUP98P52948 MIR5583-1-201ENST00000580941 59 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AC092447.9-201ENST00000603395 144 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 AL391099.1-201ENST00000624635 187 ntBASIC-0.45□□□□□ -2.48
NUP98P52948 RNU6-652P-201ENST00000365488 107 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 RNU6-790P-201ENST00000384479 105 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 RNU6-855P-201ENST00000410395 104 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 USMG5P1-201ENST00000425964 177 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 RNU7-165P-201ENST00000458864 60 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 SNORD126-201ENST00000459475 77 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.46□□□□□ -2.48
NUP98P52948 RNU6-469P-201ENST00000516253 101 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 AC020891.4-201ENST00000605745 93 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 AC005828.6-201ENST00000606610 232 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 AC098679.4-201ENST00000624241 654 ntBASIC-0.46□□□□□ -2.48
NUP98P52948 SNORD50.1-201ENST00000362987 71 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 RNU4-28P-201ENST00000364739 141 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 RNU6-442P-201ENST00000383968 104 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 MIR122-201ENST00000385044 85 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-0.47□□□□□ -2.48
NUP98P52948 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.47□□□□□ -2.48
NUP98P52948 RNU6-63P-201ENST00000516690 95 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 RNU7-156P-201ENST00000517214 74 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 RNU2-12P-201ENST00000517216 168 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 RPL23AP91-201ENST00000569211 455 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 AC008608.1-201ENST00000603910 127 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 AC011921.3-201ENST00000605540 361 ntBASIC-0.47□□□□□ -2.48
NUP98P52948 SNORD38B-201ENST00000384690 67 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 SNORD75.1-201ENST00000408373 60 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.48□□□□□ -2.49
NUP98P52948 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 RNU7-63P-201ENST00000459054 62 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 U8.19-201ENST00000459095 133 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 U8.22-201ENST00000459141 133 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 RNU7-180P-201ENST00000459240 63 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 RNU7-175P-201ENST00000515915 61 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.48□□□□□ -2.49
NUP98P52948 AC018448.1-201ENST00000552843 316 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 AC023510.2-201ENST00000622162 746 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 SNORD38B-202ENST00000625943 69 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 MIR410-201ENST00000362222 80 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 MIR601-201ENST00000385256 79 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.48□□□□□ -2.49
NUP98P52948 AL009048.1-201ENST00000450437 298 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.48□□□□□ -2.49
NUP98P52948 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 POLR3GP2-201ENST00000588366 668 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 AC092747.3-201ENST00000603769 301 ntBASIC-0.48□□□□□ -2.49
NUP98P52948 RNU6-1214P-201ENST00000363650 109 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 SNORD45.3-201ENST00000363836 72 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 RNU6-454P-201ENST00000364292 107 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 SNORA1.1-201ENST00000364671 133 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 SNORA1.2-201ENST00000365189 134 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
NUP98P52948 RNA5SP300-201ENST00000391197 107 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 RNU6-735P-201ENST00000410612 107 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 BTF3P11-201ENST00000426582 477 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 HMGN2P32-201ENST00000444648 269 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 RNU7-187P-201ENST00000458985 68 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 RNU7-185P-201ENST00000459215 60 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 AC091179.3-201ENST00000474761 144 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 UBE2V1P12-201ENST00000503954 474 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.49□□□□□ -2.49
NUP98P52948 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.49□□□□□ -2.49
NUP98P52948 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-0.49□□□□□ -2.49
NUP98P52948 MIR548AB-201ENST00000584917 84 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 MIR4791-201ENST00000607666 84 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 AF250324.2-201ENST00000608299 610 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 AC022306.2-201ENST00000617563 647 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 AL354950.2-201ENST00000617939 290 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 MTND1P7-201ENST00000632801 297 ntBASIC-0.49□□□□□ -2.49
NUP98P52948 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.5□□□□□ -2.49
NUP98P52948 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.5□□□□□ -2.49
NUP98P52948 RPL30P10-201ENST00000488148 337 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.5□□□□□ -2.49
NUP98P52948 AC133485.4-201ENST00000561835 220 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.5□□□□□ -2.49
NUP98P52948 MTND5P32-201ENST00000560711 1802 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms