Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNU6-1053P-201ENST00000515930 101 ntBASIC1.32□□□□□ -2.2
LIG4P49917 RNU6-322P-201ENST00000516010 103 ntBASIC1.32□□□□□ -2.2
LIG4P49917 DEFB117-201ENST00000602356 141 ntBASIC1.32□□□□□ -2.2
LIG4P49917 C8orf59P2-201ENST00000603441 271 ntBASIC1.32□□□□□ -2.2
LIG4P49917 AC090971.5-201ENST00000621102 293 ntBASIC1.32□□□□□ -2.2
LIG4P49917 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LIG4P49917 RNU6-833P-201ENST00000363486 107 ntBASIC1.31□□□□□ -2.2
LIG4P49917 Y_RNA.143-201ENST00000363520 106 ntBASIC1.31□□□□□ -2.2
LIG4P49917 RNU6-867P-201ENST00000364956 107 ntBASIC1.31□□□□□ -2.2
LIG4P49917 SNORD63-201ENST00000384262 68 ntBASIC1.31□□□□□ -2.2
LIG4P49917 RNU6-163P-201ENST00000384396 106 ntBASIC1.31□□□□□ -2.2
LIG4P49917 MIR150-201ENST00000385048 84 ntBASIC1.31□□□□□ -2.2
LIG4P49917 RNU4-30P-201ENST00000410245 143 ntBASIC1.31□□□□□ -2.2
LIG4P49917 PIGPP3-201ENST00000425307 415 ntBASIC1.31□□□□□ -2.2
LIG4P49917 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
LIG4P49917 AC104332.1-201ENST00000440471 797 ntBASIC1.31□□□□□ -2.2
LIG4P49917 MTND4P19-201ENST00000446659 478 ntBASIC1.31□□□□□ -2.2
LIG4P49917 AC090821.2-201ENST00000523552 176 ntBASIC1.31□□□□□ -2.2
LIG4P49917 Y_RNA.31-201ENST00000362574 102 ntBASIC1.3□□□□□ -2.2
LIG4P49917 U8.5-201ENST00000364528 136 ntBASIC1.3□□□□□ -2.2
LIG4P49917 Y_RNA.813-201ENST00000364639 102 ntBASIC1.3□□□□□ -2.2
LIG4P49917 Y_RNA.424-201ENST00000384063 103 ntBASIC1.3□□□□□ -2.2
LIG4P49917 SNORA72-201ENST00000384339 132 ntBASIC1.3□□□□□ -2.2
LIG4P49917 RNU6-321P-201ENST00000410912 106 ntBASIC1.3□□□□□ -2.2
LIG4P49917 RNU6-130P-201ENST00000411112 103 ntBASIC1.3□□□□□ -2.2
LIG4P49917 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
LIG4P49917 AC005840.1-201ENST00000498412 377 ntBASIC1.3□□□□□ -2.2
LIG4P49917 AC114811.1-201ENST00000507207 168 ntBASIC1.3□□□□□ -2.2
LIG4P49917 TRMT112P2-201ENST00000512910 132 ntBASIC1.3□□□□□ -2.2
LIG4P49917 PART1_1.1-201ENST00000611761 217 ntBASIC1.3□□□□□ -2.2
LIG4P49917 AC027279.3-201ENST00000625055 122 ntBASIC1.3□□□□□ -2.2
LIG4P49917 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
LIG4P49917 Y_RNA.253-201ENST00000364562 112 ntBASIC1.29□□□□□ -2.2
LIG4P49917 Y_RNA.341-201ENST00000365341 102 ntBASIC1.29□□□□□ -2.2
LIG4P49917 Y_RNA.445-201ENST00000384168 102 ntBASIC1.29□□□□□ -2.2
LIG4P49917 RNU6-21P-201ENST00000384710 107 ntBASIC1.29□□□□□ -2.2
LIG4P49917 AL590004.1-201ENST00000405321 300 ntBASIC1.29□□□□□ -2.2
LIG4P49917 AC024067.1-201ENST00000426199 223 ntBASIC1.29□□□□□ -2.2
LIG4P49917 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.29□□□□□ -2.2
LIG4P49917 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.29□□□□□ -2.2
LIG4P49917 MIR4762-201ENST00000585261 75 ntBASIC1.29□□□□□ -2.2
LIG4P49917 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.29□□□□□ -2.2
LIG4P49917 Y_RNA.310-201ENST00000365063 113 ntBASIC1.28□□□□□ -2.2
LIG4P49917 Y_RNA.368-201ENST00000365547 113 ntBASIC1.28□□□□□ -2.2
LIG4P49917 MIR526A1-201ENST00000384897 85 ntBASIC1.28□□□□□ -2.2
LIG4P49917 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
LIG4P49917 AL133373.1-201ENST00000497098 94 ntBASIC1.28□□□□□ -2.2
LIG4P49917 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
LIG4P49917 MIR3145-201ENST00000580727 82 ntBASIC1.28□□□□□ -2.2
LIG4P49917 AL160413.1-201ENST00000622780 310 ntBASIC1.28□□□□□ -2.2
LIG4P49917 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
LIG4P49917 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
LIG4P49917 RNU6-392P-201ENST00000364926 101 ntBASIC1.27□□□□□ -2.21
LIG4P49917 RNU6-1323P-201ENST00000384025 107 ntBASIC1.27□□□□□ -2.21
LIG4P49917 Y_RNA.456-201ENST00000384232 111 ntBASIC1.27□□□□□ -2.21
LIG4P49917 MLLT10P1-201ENST00000418346 262 ntBASIC1.27□□□□□ -2.21
LIG4P49917 PMCHL1-202ENST00000423102 261 ntBASIC1.27□□□□□ -2.21
LIG4P49917 AC010655.3-201ENST00000478818 450 ntBASIC1.27□□□□□ -2.21
LIG4P49917 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
LIG4P49917 AL357312.1-201ENST00000603879 298 ntBASIC1.27□□□□□ -2.21
LIG4P49917 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.27□□□□□ -2.21
LIG4P49917 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.27□□□□□ -2.21
LIG4P49917 AC090574.1-201ENST00000623186 233 ntBASIC1.27□□□□□ -2.21
LIG4P49917 AC091895.1-201ENST00000624494 256 ntBASIC1.27□□□□□ -2.21
LIG4P49917 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
LIG4P49917 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
LIG4P49917 Y_RNA.460-201ENST00000384255 102 ntBASIC1.26□□□□□ -2.21
LIG4P49917 MIR522-201ENST00000385071 87 ntBASIC1.26□□□□□ -2.21
LIG4P49917 U8.19-201ENST00000459095 133 ntBASIC1.26□□□□□ -2.21
LIG4P49917 HMGN1P7-201ENST00000491722 313 ntBASIC1.26□□□□□ -2.21
LIG4P49917 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
LIG4P49917 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.26□□□□□ -2.21
LIG4P49917 MTND4P29-201ENST00000503122 1372 ntBASIC1.25□□□□□ -2.21
LIG4P49917 Y_RNA.148-201ENST00000363557 117 ntBASIC1.25□□□□□ -2.21
LIG4P49917 RNU6-53P-201ENST00000365367 106 ntBASIC1.25□□□□□ -2.21
LIG4P49917 RNU6-474P-201ENST00000384243 107 ntBASIC1.25□□□□□ -2.21
LIG4P49917 MIR452-201ENST00000385020 85 ntBASIC1.25□□□□□ -2.21
LIG4P49917 Y_RNA.645-201ENST00000391229 102 ntBASIC1.25□□□□□ -2.21
LIG4P49917 HMGN1P10-201ENST00000474557 553 ntBASIC1.25□□□□□ -2.21
LIG4P49917 AC048334.1-201ENST00000477975 159 ntBASIC1.25□□□□□ -2.21
LIG4P49917 SEPT14P8-201ENST00000508026 178 ntBASIC1.25□□□□□ -2.21
LIG4P49917 SNORA31.2-201ENST00000516019 134 ntBASIC1.25□□□□□ -2.21
LIG4P49917 RNU6-1046P-201ENST00000516538 107 ntBASIC1.25□□□□□ -2.21
LIG4P49917 RNU7-116P-201ENST00000516940 62 ntBASIC1.25□□□□□ -2.21
LIG4P49917 AC136932.1-201ENST00000574771 208 ntBASIC1.25□□□□□ -2.21
LIG4P49917 POLR3GP1-201ENST00000594073 261 ntBASIC1.25□□□□□ -2.21
LIG4P49917 AC124312.5-201ENST00000604451 268 ntBASIC1.25□□□□□ -2.21
LIG4P49917 AL022345.2-201ENST00000606307 135 ntBASIC1.25□□□□□ -2.21
LIG4P49917 SNORD113-5-201ENST00000607261 78 ntBASIC1.25□□□□□ -2.21
LIG4P49917 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.25□□□□□ -2.21
LIG4P49917 Y_RNA.28-201ENST00000362554 111 ntBASIC1.24□□□□□ -2.21
LIG4P49917 Y_RNA.61-201ENST00000362835 102 ntBASIC1.24□□□□□ -2.21
LIG4P49917 Y_RNA.286-201ENST00000364813 102 ntBASIC1.24□□□□□ -2.21
LIG4P49917 Y_RNA.383-201ENST00000383855 97 ntBASIC1.24□□□□□ -2.21
LIG4P49917 SNORA25-201ENST00000384384 134 ntBASIC1.24□□□□□ -2.21
LIG4P49917 RNU6-1054P-201ENST00000411293 104 ntBASIC1.24□□□□□ -2.21
LIG4P49917 POLR2KP2-201ENST00000438155 177 ntBASIC1.24□□□□□ -2.21
LIG4P49917 RPL39P39-201ENST00000455840 151 ntBASIC1.24□□□□□ -2.21
LIG4P49917 AP003357.1-201ENST00000604497 148 ntBASIC1.24□□□□□ -2.21
LIG4P49917 RNU6-1084P-201ENST00000362498 107 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms