Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC106754.2-201ENST00000623006 233 ntBASIC1.36□□□□□ -2.19
LHX1P48742 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.36□□□□□ -2.19
LHX1P48742 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.35□□□□□ -2.19
LHX1P48742 RNY1P10-201ENST00000363268 113 ntBASIC1.35□□□□□ -2.19
LHX1P48742 Y_RNA.341-201ENST00000365341 102 ntBASIC1.35□□□□□ -2.19
LHX1P48742 SEPT14P8-201ENST00000508026 178 ntBASIC1.35□□□□□ -2.19
LHX1P48742 RNU7-12P-201ENST00000516030 62 ntBASIC1.35□□□□□ -2.19
LHX1P48742 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.35□□□□□ -2.19
LHX1P48742 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.35□□□□□ -2.19
LHX1P48742 AC136932.1-201ENST00000574771 208 ntBASIC1.35□□□□□ -2.19
LHX1P48742 MIR376A1-201ENST00000616574 68 ntBASIC1.35□□□□□ -2.19
LHX1P48742 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LHX1P48742 Y_RNA.183-201ENST00000363882 113 ntBASIC1.34□□□□□ -2.19
LHX1P48742 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
LHX1P48742 AC117470.1-201ENST00000381974 330 ntBASIC1.34□□□□□ -2.19
LHX1P48742 RNU6-1105P-201ENST00000384774 107 ntBASIC1.34□□□□□ -2.19
LHX1P48742 MIR1252-201ENST00000408861 65 ntBASIC1.34□□□□□ -2.19
LHX1P48742 POLR2KP2-201ENST00000438155 177 ntBASIC1.34□□□□□ -2.19
LHX1P48742 Z98949.2-201ENST00000440996 144 ntBASIC1.34□□□□□ -2.19
LHX1P48742 AC092991.1-201ENST00000477176 376 ntBASIC1.34□□□□□ -2.19
LHX1P48742 MIR3145-201ENST00000580727 82 ntBASIC1.34□□□□□ -2.19
LHX1P48742 RAC1P9-201ENST00000604990 392 ntBASIC1.34□□□□□ -2.19
LHX1P48742 MIR6078-201ENST00000611069 100 ntBASIC1.34□□□□□ -2.19
LHX1P48742 AC068647.2-201ENST00000637380 353 ntBASIC1.34□□□□□ -2.19
LHX1P48742 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
LHX1P48742 RNU6-199P-201ENST00000362954 107 ntBASIC1.33□□□□□ -2.2
LHX1P48742 SNORD68-201ENST00000363214 84 ntBASIC1.33□□□□□ -2.2
LHX1P48742 Y_RNA.383-201ENST00000383855 97 ntBASIC1.33□□□□□ -2.2
LHX1P48742 Y_RNA.456-201ENST00000384232 111 ntBASIC1.33□□□□□ -2.2
LHX1P48742 AL590004.1-201ENST00000405321 300 ntBASIC1.33□□□□□ -2.2
LHX1P48742 RPL39P38-201ENST00000467018 153 ntBASIC1.33□□□□□ -2.2
LHX1P48742 RNU6-897P-201ENST00000517135 105 ntBASIC1.33□□□□□ -2.2
LHX1P48742 AL512310.8-201ENST00000550183 120 ntBASIC1.33□□□□□ -2.2
LHX1P48742 AC020661.2-201ENST00000560114 134 ntBASIC1.33□□□□□ -2.2
LHX1P48742 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LHX1P48742 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
LHX1P48742 MIRLET7C-201ENST00000362160 84 ntBASIC1.32□□□□□ -2.2
LHX1P48742 MIR337-201ENST00000362281 93 ntBASIC1.32□□□□□ -2.2
LHX1P48742 Y_RNA.11-201ENST00000362375 109 ntBASIC1.32□□□□□ -2.2
LHX1P48742 SNORD113-8-201ENST00000363497 74 ntBASIC1.32□□□□□ -2.2
LHX1P48742 Y_RNA.158-201ENST00000363651 101 ntBASIC1.32□□□□□ -2.2
LHX1P48742 Y_RNA.216-201ENST00000364205 93 ntBASIC1.32□□□□□ -2.2
LHX1P48742 Y_RNA.310-201ENST00000365063 113 ntBASIC1.32□□□□□ -2.2
LHX1P48742 Y_RNA.368-201ENST00000365547 113 ntBASIC1.32□□□□□ -2.2
LHX1P48742 Y_RNA.380-201ENST00000365663 111 ntBASIC1.32□□□□□ -2.2
LHX1P48742 SNORA72-201ENST00000384339 132 ntBASIC1.32□□□□□ -2.2
LHX1P48742 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
LHX1P48742 AC093850.1-201ENST00000454121 251 ntBASIC1.32□□□□□ -2.2
LHX1P48742 AC010655.3-201ENST00000478818 450 ntBASIC1.32□□□□□ -2.2
LHX1P48742 Y_RNA.701-201ENST00000516812 110 ntBASIC1.32□□□□□ -2.2
LHX1P48742 AL160236.1-201ENST00000556317 195 ntBASIC1.32□□□□□ -2.2
LHX1P48742 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
LHX1P48742 MIR4300-201ENST00000581016 96 ntBASIC1.32□□□□□ -2.2
LHX1P48742 AL591926.4-201ENST00000616895 298 ntBASIC1.32□□□□□ -2.2
LHX1P48742 Y_RNA.202-201ENST00000364083 110 ntBASIC1.31□□□□□ -2.2
LHX1P48742 Y_RNA.286-201ENST00000364813 102 ntBASIC1.31□□□□□ -2.2
LHX1P48742 Y_RNA.455-201ENST00000384230 98 ntBASIC1.31□□□□□ -2.2
LHX1P48742 RNU6-163P-201ENST00000384396 106 ntBASIC1.31□□□□□ -2.2
LHX1P48742 Y_RNA.602-201ENST00000410535 92 ntBASIC1.31□□□□□ -2.2
LHX1P48742 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
LHX1P48742 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
LHX1P48742 U8.19-201ENST00000459095 133 ntBASIC1.31□□□□□ -2.2
LHX1P48742 HMGN1P10-201ENST00000474557 553 ntBASIC1.31□□□□□ -2.2
LHX1P48742 RPL30P7-201ENST00000479312 323 ntBASIC1.31□□□□□ -2.2
LHX1P48742 RNU6-922P-201ENST00000516753 99 ntBASIC1.31□□□□□ -2.2
LHX1P48742 SNORA40.15-201ENST00000516884 107 ntBASIC1.31□□□□□ -2.2
LHX1P48742 RNU7-116P-201ENST00000516940 62 ntBASIC1.31□□□□□ -2.2
LHX1P48742 AL356055.1-201ENST00000602528 446 ntBASIC1.31□□□□□ -2.2
LHX1P48742 AC120024.3-201ENST00000603167 156 ntBASIC1.31□□□□□ -2.2
LHX1P48742 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
LHX1P48742 Y_RNA.4-201ENST00000362333 112 ntBASIC1.3□□□□□ -2.2
LHX1P48742 RNU6-1323P-201ENST00000384025 107 ntBASIC1.3□□□□□ -2.2
LHX1P48742 Y_RNA.527-201ENST00000384573 102 ntBASIC1.3□□□□□ -2.2
LHX1P48742 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
LHX1P48742 SNORD115-46-201ENST00000390982 71 ntBASIC1.3□□□□□ -2.2
LHX1P48742 MIR891A-201ENST00000401237 79 ntBASIC1.3□□□□□ -2.2
LHX1P48742 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.3□□□□□ -2.2
LHX1P48742 CYCTP-201ENST00000504253 315 ntBASIC1.3□□□□□ -2.2
LHX1P48742 RN7SKP88-201ENST00000516847 250 ntBASIC1.3□□□□□ -2.2
LHX1P48742 RNU6-1116P-201ENST00000517269 99 ntBASIC1.3□□□□□ -2.2
LHX1P48742 CYP3A52P-201ENST00000563326 91 ntBASIC1.3□□□□□ -2.2
LHX1P48742 MIR3664-201ENST00000579074 99 ntBASIC1.3□□□□□ -2.2
LHX1P48742 MIR4781-201ENST00000585250 76 ntBASIC1.3□□□□□ -2.2
LHX1P48742 POLR3GP1-201ENST00000594073 261 ntBASIC1.3□□□□□ -2.2
LHX1P48742 AL513534.2-201ENST00000603836 250 ntBASIC1.3□□□□□ -2.2
LHX1P48742 7SK.8-201ENST00000612110 250 ntBASIC1.3□□□□□ -2.2
LHX1P48742 7SK.11-201ENST00000615477 250 ntBASIC1.3□□□□□ -2.2
LHX1P48742 7SK.13-201ENST00000622040 250 ntBASIC1.3□□□□□ -2.2
LHX1P48742 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
LHX1P48742 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LHX1P48742 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LHX1P48742 RNU4-80P-201ENST00000363200 141 ntBASIC1.29□□□□□ -2.2
LHX1P48742 Y_RNA.253-201ENST00000364562 112 ntBASIC1.29□□□□□ -2.2
LHX1P48742 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
LHX1P48742 RNU6-1248P-201ENST00000391096 64 ntBASIC1.29□□□□□ -2.2
LHX1P48742 PIGPP3-201ENST00000425307 415 ntBASIC1.29□□□□□ -2.2
LHX1P48742 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
LHX1P48742 RNU6-322P-201ENST00000516010 103 ntBASIC1.29□□□□□ -2.2
LHX1P48742 AC090049.2-201ENST00000550377 109 ntBASIC1.29□□□□□ -2.2
LHX1P48742 AC044792.1-201ENST00000593294 196 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms