Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 MIR570-201ENST00000384917 97 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
RPL28P46779 SEPT14P3-201ENST00000439401 183 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 AL732372.2-207ENST00000445840 183 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 SEPT14P2-201ENST00000453405 183 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 SEPT14P4-201ENST00000513445 186 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 SNORA40.9-201ENST00000515895 93 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 RNA5SP227-201ENST00000516184 113 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 RNU6-830P-201ENST00000516353 107 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 Y_RNA.693-201ENST00000516641 110 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 RNU2-12P-201ENST00000517216 168 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 FO082796.1-201ENST00000523795 183 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 MIR5701-3-201ENST00000578890 82 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 MIR4264-201ENST00000583520 66 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 MIR5701-1-201ENST00000585138 82 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 DLEU2_1.1-201ENST00000612089 120 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 DLEU2_1.2-201ENST00000614667 120 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 MIR5701-2-201ENST00000615634 82 ntBASIC-0.1□□□□□ -2.43
RPL28P46779 RNU6-716P-201ENST00000365621 103 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 SNORD38C-201ENST00000384381 69 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 SNORA51.10-201ENST00000384418 136 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 MIR489-201ENST00000384923 84 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 RNU6-205P-201ENST00000390858 107 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 SNORA75.6-201ENST00000391318 127 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 MTCO2P27-201ENST00000420740 428 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPL28P46779 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.11□□□□□ -2.43
RPL28P46779 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.11□□□□□ -2.43
RPL28P46779 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 RPL23AP91-201ENST00000569211 455 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 AC090897.1-201ENST00000580909 226 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 AC104408.1-201ENST00000605241 170 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 DISC2.1-201ENST00000612827 205 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 AC023510.2-201ENST00000622162 746 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.11□□□□□ -2.43
RPL28P46779 MTND1P7-201ENST00000632801 297 ntBASIC-0.11□□□□□ -2.43
RPL28P46779 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.11□□□□□ -2.43
RPL28P46779 RNU6-879P-201ENST00000364328 108 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 Y_RNA.414-201ENST00000384011 101 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 RNU6-125P-201ENST00000384505 107 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.12□□□□□ -2.43
RPL28P46779 AL358176.2-201ENST00000425769 204 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 AL353997.1-201ENST00000432936 108 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.12□□□□□ -2.43
RPL28P46779 HMGN1P10-201ENST00000474557 553 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 AC005730.3-201ENST00000583067 366 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 AC240442.1-201ENST00000616055 283 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 Pinc.1-201ENST00000616452 154 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 MIR6863-201ENST00000636112 90 ntBASIC-0.12□□□□□ -2.43
RPL28P46779 Y_RNA.172-201ENST00000363765 102 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 SNORD14E-201ENST00000364009 85 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 RNU6-842P-201ENST00000384269 107 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 RNU6-318P-201ENST00000384283 103 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 SNORA72-201ENST00000384339 132 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 U8.17-201ENST00000391292 132 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 MTCO3P40-201ENST00000392516 676 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 MIR938-201ENST00000401216 83 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.13□□□□□ -2.43
RPL28P46779 BTF3P11-201ENST00000426582 477 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 SEPT7P4-201ENST00000437076 306 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 MIR5190-201ENST00000581537 80 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 uc_338.4-201ENST00000616635 176 ntBASIC-0.13□□□□□ -2.43
RPL28P46779 RNU6-874P-201ENST00000362390 105 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 Y_RNA.48-201ENST00000362710 103 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 RNU6-1059P-201ENST00000363752 98 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 MTCO2P33-201ENST00000402100 465 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 AL031003.1-201ENST00000404229 172 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 RNU6-908P-201ENST00000410160 94 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 RNU2-59P-201ENST00000410482 191 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 RNU2-61P-201ENST00000411069 191 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 SNRPGP14-201ENST00000435400 219 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 RNU4-77P-201ENST00000516692 156 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 AC105029.1-201ENST00000520250 669 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 AL512360.1-201ENST00000555346 234 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 AC008608.1-201ENST00000603910 127 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 AC005972.2-201ENST00000604690 348 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 MIR4791-201ENST00000607666 84 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 AL359880.1-201ENST00000621879 266 ntBASIC-0.14□□□□□ -2.43
RPL28P46779 SNORD114-5-201ENST00000362928 70 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
RPL28P46779 MIR1197-201ENST00000408818 88 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.15□□□□□ -2.43
RPL28P46779 USP9YP30-201ENST00000430729 455 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.15□□□□□ -2.43
RPL28P46779 RNU2-13P-201ENST00000515909 113 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 MIR3678-201ENST00000578455 94 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 AL162413.1-201ENST00000603198 110 ntBASIC-0.15□□□□□ -2.43
RPL28P46779 AC004467.1-201ENST00000615678 330 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms