Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RNU2-12P-201ENST00000517216 168 ntBASIC1.6□□□□□ -2.15
MTHFRP42898 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.6□□□□□ -2.15
MTHFRP42898 AP003733.2-201ENST00000529409 171 ntBASIC1.6□□□□□ -2.15
MTHFRP42898 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.6□□□□□ -2.15
MTHFRP42898 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.6□□□□□ -2.15
MTHFRP42898 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
MTHFRP42898 MIR4709-201ENST00000577272 72 ntBASIC1.6□□□□□ -2.15
MTHFRP42898 AC005176.2-201ENST00000596933 147 ntBASIC1.6□□□□□ -2.15
MTHFRP42898 AC022441.3-201ENST00000605737 136 ntBASIC1.6□□□□□ -2.15
MTHFRP42898 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
MTHFRP42898 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.59□□□□□ -2.15
MTHFRP42898 SNORD113-8-201ENST00000363497 74 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 RNU6-1175P-201ENST00000365200 107 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 Y_RNA.361-201ENST00000365515 120 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 Y_RNA.376-201ENST00000365638 108 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 RNU6-203P-201ENST00000384038 104 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 RNU4-30P-201ENST00000410245 143 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.59□□□□□ -2.15
MTHFRP42898 HSPE1P24-201ENST00000450782 238 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.59□□□□□ -2.15
MTHFRP42898 RNU7-172P-201ENST00000517125 64 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.59□□□□□ -2.15
MTHFRP42898 MIR4452-201ENST00000583004 71 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 AL929325.1-201ENST00000603096 117 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 AC005828.6-201ENST00000606610 232 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 AL353770.2-201ENST00000620024 78 ntBASIC1.59□□□□□ -2.15
MTHFRP42898 SNORD33-201ENST00000362761 85 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 Y_RNA.84-201ENST00000363011 104 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 Y_RNA.446-201ENST00000384178 104 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 Y_RNA.483-201ENST00000384380 101 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 Y_RNA.541-201ENST00000384640 113 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 RNU2-54P-201ENST00000410299 190 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.58□□□□□ -2.16
MTHFRP42898 AC245047.3-201ENST00000429428 127 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.58□□□□□ -2.16
MTHFRP42898 RNU6-1143P-201ENST00000516125 104 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 Y_RNA.668-201ENST00000516233 93 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 SNORA31.10-201ENST00000516482 106 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 AP001282.2-201ENST00000616149 309 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 7SK.10-201ENST00000621414 298 ntBASIC1.58□□□□□ -2.16
MTHFRP42898 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
MTHFRP42898 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
MTHFRP42898 ICE2P2-201ENST00000483823 2787 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 RNU6-271P-201ENST00000363858 105 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 Y_RNA.193-201ENST00000363979 102 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 RNU4-13P-201ENST00000364019 141 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 SNORD115-30-201ENST00000364117 82 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 Y_RNA.243-201ENST00000364481 109 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 Y_RNA.452-201ENST00000384202 108 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 RNU6-196P-201ENST00000384315 107 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 MIR873-201ENST00000401120 77 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 RNU6-1203P-201ENST00000410703 110 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 RNU5A-5P-201ENST00000411054 116 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.57□□□□□ -2.16
MTHFRP42898 RNA5SP102-201ENST00000516865 106 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 MIR8054-201ENST00000620877 86 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 MIR8063-201ENST00000621930 81 ntBASIC1.57□□□□□ -2.16
MTHFRP42898 AC018630.2-201ENST00000534866 2403 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 MIR302D-201ENST00000362275 68 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 Y_RNA.16-201ENST00000362421 102 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 RNU6-42P-201ENST00000384165 107 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 Y_RNA.461-201ENST00000384263 103 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 RNU6-376P-201ENST00000384731 106 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 Y_RNA.602-201ENST00000410535 92 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.56□□□□□ -2.16
MTHFRP42898 RNU7-110P-201ENST00000516891 62 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 AC011373.1-201ENST00000607270 237 ntBASIC1.56□□□□□ -2.16
MTHFRP42898 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.55□□□□□ -2.16
MTHFRP42898 Y_RNA.418-201ENST00000384029 102 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 RNU6-713P-201ENST00000384761 107 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 RNU6-440P-201ENST00000390882 105 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 AL390729.2-201ENST00000416137 156 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 AC005042.3-201ENST00000453230 174 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.55□□□□□ -2.16
MTHFRP42898 RPS26P55-201ENST00000471178 356 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 RNU6-436P-201ENST00000516171 114 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 RNU6-155P-201ENST00000516347 100 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 RNU6-570P-201ENST00000517051 105 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 RNU6-902P-201ENST00000517212 91 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 RPL21P9-201ENST00000556149 474 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.55□□□□□ -2.16
MTHFRP42898 MIR3149-201ENST00000584629 83 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 AC006380.1-201ENST00000603598 186 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 SNORD113-5-201ENST00000607261 78 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 MIR6078-201ENST00000611069 100 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.55□□□□□ -2.16
MTHFRP42898 MIR6079-201ENST00000635807 62 ntBASIC1.55□□□□□ -2.16
MTHFRP42898 RNU6-290P-201ENST00000365212 101 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 Y_RNA.331-201ENST00000365267 102 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 RNU6-505P-201ENST00000384427 107 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 RNU6-950P-201ENST00000384651 107 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 AL161935.2-201ENST00000414627 60 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.54□□□□□ -2.16
MTHFRP42898 SUMO1P2-201ENST00000452524 304 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 RNU7-94P-201ENST00000459576 63 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 AC091021.1-201ENST00000468051 388 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 TRBVB-201ENST00000477100 408 ntBASIC1.54□□□□□ -2.16
MTHFRP42898 AC099513.1-201ENST00000490423 301 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms