Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.43□□□□□ -2.18
HADHAP40939 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
HADHAP40939 Y_RNA.714-201ENST00000517065 90 ntBASIC1.43□□□□□ -2.18
HADHAP40939 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.43□□□□□ -2.18
HADHAP40939 MIR4778-201ENST00000577635 80 ntBASIC1.43□□□□□ -2.18
HADHAP40939 GHRLOS.1-201ENST00000610995 70 ntBASIC1.43□□□□□ -2.18
HADHAP40939 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
HADHAP40939 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
HADHAP40939 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
HADHAP40939 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
HADHAP40939 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HADHAP40939 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
HADHAP40939 Y_RNA.183-201ENST00000363882 113 ntBASIC1.42□□□□□ -2.18
HADHAP40939 Y_RNA.310-201ENST00000365063 113 ntBASIC1.42□□□□□ -2.18
HADHAP40939 Y_RNA.380-201ENST00000365663 111 ntBASIC1.42□□□□□ -2.18
HADHAP40939 RNU6-937P-201ENST00000384325 106 ntBASIC1.42□□□□□ -2.18
HADHAP40939 RNU6-101P-201ENST00000410323 104 ntBASIC1.42□□□□□ -2.18
HADHAP40939 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.42□□□□□ -2.18
HADHAP40939 HMGN1P10-201ENST00000474557 553 ntBASIC1.42□□□□□ -2.18
HADHAP40939 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
HADHAP40939 Y_RNA.715-201ENST00000517082 110 ntBASIC1.42□□□□□ -2.18
HADHAP40939 AC120024.3-201ENST00000603167 156 ntBASIC1.42□□□□□ -2.18
HADHAP40939 Y_RNA.148-201ENST00000363557 117 ntBASIC1.41□□□□□ -2.18
HADHAP40939 Y_RNA.164-201ENST00000363709 102 ntBASIC1.41□□□□□ -2.18
HADHAP40939 Y_RNA.238-201ENST00000364441 102 ntBASIC1.41□□□□□ -2.18
HADHAP40939 RNU6-1080P-201ENST00000383982 107 ntBASIC1.41□□□□□ -2.18
HADHAP40939 MIR1252-201ENST00000408861 65 ntBASIC1.41□□□□□ -2.18
HADHAP40939 AL160236.1-201ENST00000556317 195 ntBASIC1.41□□□□□ -2.18
HADHAP40939 CYP3A52P-201ENST00000563326 91 ntBASIC1.41□□□□□ -2.18
HADHAP40939 MIR4781-201ENST00000585250 76 ntBASIC1.41□□□□□ -2.18
HADHAP40939 PART1_1.1-201ENST00000611761 217 ntBASIC1.41□□□□□ -2.18
HADHAP40939 MIR7974-201ENST00000615835 79 ntBASIC1.41□□□□□ -2.18
HADHAP40939 Y_RNA.31-201ENST00000362574 102 ntBASIC1.4□□□□□ -2.19
HADHAP40939 SNORD81.1-201ENST00000363064 77 ntBASIC1.4□□□□□ -2.19
HADHAP40939 SNORD68-201ENST00000363214 84 ntBASIC1.4□□□□□ -2.19
HADHAP40939 Y_RNA.813-201ENST00000364639 102 ntBASIC1.4□□□□□ -2.19
HADHAP40939 RNU6-474P-201ENST00000384243 107 ntBASIC1.4□□□□□ -2.19
HADHAP40939 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
HADHAP40939 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.4□□□□□ -2.19
HADHAP40939 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.4□□□□□ -2.19
HADHAP40939 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
HADHAP40939 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.4□□□□□ -2.19
HADHAP40939 DEFB117-201ENST00000602356 141 ntBASIC1.4□□□□□ -2.19
HADHAP40939 AL591926.4-201ENST00000616895 298 ntBASIC1.4□□□□□ -2.19
HADHAP40939 AC106754.2-201ENST00000623006 233 ntBASIC1.4□□□□□ -2.19
HADHAP40939 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.39□□□□□ -2.19
HADHAP40939 AL391987.6-201ENST00000305671 199 ntBASIC1.39□□□□□ -2.19
HADHAP40939 SNORA7.1-201ENST00000363750 139 ntBASIC1.39□□□□□ -2.19
HADHAP40939 Y_RNA.172-201ENST00000363765 102 ntBASIC1.39□□□□□ -2.19
HADHAP40939 RNU6-163P-201ENST00000384396 106 ntBASIC1.39□□□□□ -2.19
HADHAP40939 MIR452-201ENST00000385020 85 ntBASIC1.39□□□□□ -2.19
HADHAP40939 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
HADHAP40939 RNU6-308P-201ENST00000390957 107 ntBASIC1.39□□□□□ -2.19
HADHAP40939 RNU6-823P-201ENST00000391042 103 ntBASIC1.39□□□□□ -2.19
HADHAP40939 Y_RNA.645-201ENST00000391229 102 ntBASIC1.39□□□□□ -2.19
HADHAP40939 MIR548P-201ENST00000408336 84 ntBASIC1.39□□□□□ -2.19
HADHAP40939 RNU6-130P-201ENST00000411112 103 ntBASIC1.39□□□□□ -2.19
HADHAP40939 POLR2KP2-201ENST00000438155 177 ntBASIC1.39□□□□□ -2.19
HADHAP40939 HMGN1P7-201ENST00000491722 313 ntBASIC1.39□□□□□ -2.19
HADHAP40939 AC005840.1-201ENST00000498412 377 ntBASIC1.39□□□□□ -2.19
HADHAP40939 MIR4421-201ENST00000578133 69 ntBASIC1.39□□□□□ -2.19
HADHAP40939 AP003357.1-201ENST00000604497 148 ntBASIC1.39□□□□□ -2.19
HADHAP40939 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.39□□□□□ -2.19
HADHAP40939 MIR376A1-201ENST00000616574 68 ntBASIC1.39□□□□□ -2.19
HADHAP40939 AC007742.2-201ENST00000618226 398 ntBASIC1.39□□□□□ -2.19
HADHAP40939 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HADHAP40939 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HADHAP40939 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
HADHAP40939 Y_RNA.253-201ENST00000364562 112 ntBASIC1.38□□□□□ -2.19
HADHAP40939 Y_RNA.383-201ENST00000383855 97 ntBASIC1.38□□□□□ -2.19
HADHAP40939 Y_RNA.389-201ENST00000383924 113 ntBASIC1.38□□□□□ -2.19
HADHAP40939 RNU4-30P-201ENST00000410245 143 ntBASIC1.38□□□□□ -2.19
HADHAP40939 RNA5SP247-201ENST00000411181 105 ntBASIC1.38□□□□□ -2.19
HADHAP40939 MTCO2P12-201ENST00000427426 682 ntBASIC1.38□□□□□ -2.19
HADHAP40939 Y_RNA.711-201ENST00000516993 102 ntBASIC1.38□□□□□ -2.19
HADHAP40939 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
HADHAP40939 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.38□□□□□ -2.19
HADHAP40939 AC068647.2-201ENST00000637380 353 ntBASIC1.38□□□□□ -2.19
HADHAP40939 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HADHAP40939 Y_RNA.222-201ENST00000364264 102 ntBASIC1.37□□□□□ -2.19
HADHAP40939 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
HADHAP40939 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
HADHAP40939 HMGN2P32-201ENST00000444648 269 ntBASIC1.37□□□□□ -2.19
HADHAP40939 MTND4LP30-201ENST00000454092 297 ntBASIC1.37□□□□□ -2.19
HADHAP40939 RNU6-917P-201ENST00000516294 104 ntBASIC1.37□□□□□ -2.19
HADHAP40939 RNU6-922P-201ENST00000516753 99 ntBASIC1.37□□□□□ -2.19
HADHAP40939 AC087685.1-201ENST00000587507 141 ntBASIC1.37□□□□□ -2.19
HADHAP40939 POLR3GP1-201ENST00000594073 261 ntBASIC1.37□□□□□ -2.19
HADHAP40939 AC104695.3-201ENST00000604052 296 ntBASIC1.37□□□□□ -2.19
HADHAP40939 MTND4P29-201ENST00000503122 1372 ntBASIC1.36□□□□□ -2.19
HADHAP40939 Y_RNA.158-201ENST00000363651 101 ntBASIC1.36□□□□□ -2.19
HADHAP40939 Y_RNA.276-201ENST00000364732 109 ntBASIC1.36□□□□□ -2.19
HADHAP40939 SNORA25.8-201ENST00000364831 128 ntBASIC1.36□□□□□ -2.19
HADHAP40939 Y_RNA.327-201ENST00000365201 102 ntBASIC1.36□□□□□ -2.19
HADHAP40939 MIR15B-201ENST00000385045 98 ntBASIC1.36□□□□□ -2.19
HADHAP40939 MIR522-201ENST00000385071 87 ntBASIC1.36□□□□□ -2.19
HADHAP40939 SNORD115-46-201ENST00000390982 71 ntBASIC1.36□□□□□ -2.19
HADHAP40939 AC093850.1-201ENST00000454121 251 ntBASIC1.36□□□□□ -2.19
HADHAP40939 RPL39P39-201ENST00000455840 151 ntBASIC1.36□□□□□ -2.19
HADHAP40939 AC136628.3-201ENST00000521868 290 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms