Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 BTF3P11-201ENST00000426582 477 ntBASIC2.16□□□□□ -2.06
COL15A1P39059 RNU6-388P-201ENST00000517012 105 ntBASIC2.16□□□□□ -2.06
COL15A1P39059 RNU6-389P-201ENST00000517048 105 ntBASIC2.16□□□□□ -2.06
COL15A1P39059 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.16□□□□□ -2.06
COL15A1P39059 AC068647.2-201ENST00000637380 353 ntBASIC2.16□□□□□ -2.06
COL15A1P39059 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
COL15A1P39059 SNORD116-13-201ENST00000384408 92 ntBASIC2.15□□□□□ -2.07
COL15A1P39059 Y_RNA.552-201ENST00000384665 112 ntBASIC2.15□□□□□ -2.07
COL15A1P39059 MIR1283-2-201ENST00000408621 87 ntBASIC2.15□□□□□ -2.07
COL15A1P39059 RPS20P10-201ENST00000451209 253 ntBASIC2.15□□□□□ -2.07
COL15A1P39059 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.15□□□□□ -2.07
COL15A1P39059 RNU7-99P-201ENST00000516271 62 ntBASIC2.15□□□□□ -2.07
COL15A1P39059 MIR4419B-201ENST00000577260 68 ntBASIC2.15□□□□□ -2.07
COL15A1P39059 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
COL15A1P39059 BX248123.2-201ENST00000606318 124 ntBASIC2.15□□□□□ -2.07
COL15A1P39059 ZNF702P-202ENST00000434269 1966 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 RNU6-1272P-201ENST00000362776 107 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 Y_RNA.172-201ENST00000363765 102 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 Y_RNA.310-201ENST00000365063 113 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.14□□□□□ -2.07
COL15A1P39059 RNU6-338P-201ENST00000383888 105 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 AL117342.1-201ENST00000404861 406 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.14□□□□□ -2.07
COL15A1P39059 RNU6-111P-201ENST00000517179 105 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 MIR5094-201ENST00000578766 85 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 AC073413.2-201ENST00000604332 360 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 AC090425.1-201ENST00000610007 140 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 snoU18.1-201ENST00000629629 71 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 AC095038.3-201ENST00000634439 195 ntBASIC2.14□□□□□ -2.07
COL15A1P39059 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL15A1P39059 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.13□□□□□ -2.07
COL15A1P39059 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL15A1P39059 RNU6-1048P-201ENST00000364054 107 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 RNU6-801P-201ENST00000364087 105 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 Y_RNA.217-201ENST00000364214 105 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 Y_RNA.515-201ENST00000384535 112 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 RNU6-763P-201ENST00000390865 106 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 MTCO2P33-201ENST00000402100 465 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 RNA5SP511-201ENST00000410487 115 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 AC099677.2-201ENST00000436385 175 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 AL135790.2-201ENST00000437701 267 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 Y_RNA.641-201ENST00000459414 105 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 AC024995.1-201ENST00000523014 93 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 AC005972.2-201ENST00000604690 348 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 AC069114.2-201ENST00000604699 304 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
COL15A1P39059 AC134026.1-201ENST00000623249 2239 ntBASIC2.13□□□□□ -2.07
COL15A1P39059 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL15A1P39059 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL15A1P39059 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL15A1P39059 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL15A1P39059 SNORA33-201ENST00000363664 130 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 SNORA72.4-201ENST00000384174 132 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 Y_RNA.539-201ENST00000384635 107 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
COL15A1P39059 RNU6-847P-201ENST00000411115 108 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 RPL23AP6-201ENST00000446637 472 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 RNU4-71P-201ENST00000516258 113 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 MIR4643-201ENST00000577473 78 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 AL645939.4-201ENST00000604495 135 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 AC004832.4-201ENST00000608952 331 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 AL512598.1-201ENST00000610158 273 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 AC078938.1-201ENST00000620993 318 ntBASIC2.12□□□□□ -2.07
COL15A1P39059 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL15A1P39059 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 RNU6-899P-201ENST00000363947 107 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 SNORA16B-201ENST00000364674 135 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 RNU6-117P-201ENST00000365415 107 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 RNU6-211P-201ENST00000384047 107 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 SNORA26.5-201ENST00000391215 123 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 AL512604.1-201ENST00000404812 257 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 RNU6-651P-201ENST00000411040 105 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 AL162725.1-201ENST00000435405 301 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 RNU7-141P-201ENST00000459304 62 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 RNA5SP57-201ENST00000459463 123 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 AL163195.1-201ENST00000496941 348 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.11□□□□□ -2.07
COL15A1P39059 AC015720.1-201ENST00000565251 277 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.11□□□□□ -2.07
COL15A1P39059 AL078604.3-201ENST00000615580 211 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.11□□□□□ -2.07
COL15A1P39059 Y_RNA.82-201ENST00000363000 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.92-201ENST00000363043 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.191-201ENST00000363972 113 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.235-201ENST00000364412 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.306-201ENST00000365015 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.312-201ENST00000365089 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.322-201ENST00000365151 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 RNU2-14P-201ENST00000411053 191 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.650-201ENST00000459002 102 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 U8.19-201ENST00000459095 133 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 Y_RNA.637-201ENST00000459424 114 ntBASIC2.1□□□□□ -2.07
COL15A1P39059 AC117454.1-201ENST00000491120 168 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms