Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RNU6-961P-201ENST00000363893 105 ntBASIC1.85□□□□□ -2.11
KRT9P35527 Y_RNA.199-201ENST00000364014 102 ntBASIC1.85□□□□□ -2.11
KRT9P35527 Y_RNA.270-201ENST00000364693 104 ntBASIC1.85□□□□□ -2.11
KRT9P35527 Y_RNA.286-201ENST00000364813 102 ntBASIC1.85□□□□□ -2.11
KRT9P35527 RNA5SP363-201ENST00000365072 115 ntBASIC1.85□□□□□ -2.11
KRT9P35527 RNU6-1175P-201ENST00000365200 107 ntBASIC1.85□□□□□ -2.11
KRT9P35527 RNU6-1062P-201ENST00000383908 107 ntBASIC1.85□□□□□ -2.11
KRT9P35527 RNU6-514P-201ENST00000384208 107 ntBASIC1.85□□□□□ -2.11
KRT9P35527 U8.13-201ENST00000390842 128 ntBASIC1.85□□□□□ -2.11
KRT9P35527 AL355796.1-201ENST00000406706 323 ntBASIC1.85□□□□□ -2.11
KRT9P35527 MIR1298-201ENST00000408783 112 ntBASIC1.85□□□□□ -2.11
KRT9P35527 SUMO1P3-201ENST00000439961 304 ntBASIC1.85□□□□□ -2.11
KRT9P35527 RPS27P1-201ENST00000450552 247 ntBASIC1.85□□□□□ -2.11
KRT9P35527 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.85□□□□□ -2.11
KRT9P35527 MIR3684-201ENST00000579779 74 ntBASIC1.85□□□□□ -2.11
KRT9P35527 MIR4285-201ENST00000581001 85 ntBASIC1.85□□□□□ -2.11
KRT9P35527 AC005176.2-201ENST00000596933 147 ntBASIC1.85□□□□□ -2.11
KRT9P35527 AC022217.4-201ENST00000604389 163 ntBASIC1.85□□□□□ -2.11
KRT9P35527 MIR8081-201ENST00000611533 95 ntBASIC1.85□□□□□ -2.11
KRT9P35527 AC004792.1-201ENST00000614523 137 ntBASIC1.85□□□□□ -2.11
KRT9P35527 AC084768.2-201ENST00000622736 221 ntBASIC1.85□□□□□ -2.11
KRT9P35527 MIR3674-201ENST00000636576 68 ntBASIC1.85□□□□□ -2.11
KRT9P35527 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRT9P35527 SNORA25.1-201ENST00000362326 128 ntBASIC1.84□□□□□ -2.11
KRT9P35527 Y_RNA.274-201ENST00000364714 101 ntBASIC1.84□□□□□ -2.11
KRT9P35527 RNU6-1310P-201ENST00000384153 107 ntBASIC1.84□□□□□ -2.11
KRT9P35527 SNORA20B-201ENST00000384220 132 ntBASIC1.84□□□□□ -2.11
KRT9P35527 Y_RNA.793-201ENST00000411222 111 ntBASIC1.84□□□□□ -2.11
KRT9P35527 CYCSP49-201ENST00000420810 319 ntBASIC1.84□□□□□ -2.11
KRT9P35527 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.84□□□□□ -2.11
KRT9P35527 RNU7-34P-201ENST00000459394 64 ntBASIC1.84□□□□□ -2.11
KRT9P35527 MIR4643-201ENST00000577473 78 ntBASIC1.84□□□□□ -2.11
KRT9P35527 MIR4423-201ENST00000580922 80 ntBASIC1.84□□□□□ -2.11
KRT9P35527 AC127459.3-201ENST00000624328 466 ntBASIC1.84□□□□□ -2.11
KRT9P35527 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KRT9P35527 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRT9P35527 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
KRT9P35527 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRT9P35527 MIR126-201ENST00000362291 85 ntBASIC1.83□□□□□ -2.12
KRT9P35527 Y_RNA.4-201ENST00000362333 112 ntBASIC1.83□□□□□ -2.12
KRT9P35527 Y_RNA.331-201ENST00000365267 102 ntBASIC1.83□□□□□ -2.12
KRT9P35527 RNU6-203P-201ENST00000384038 104 ntBASIC1.83□□□□□ -2.12
KRT9P35527 Y_RNA.555-201ENST00000384673 110 ntBASIC1.83□□□□□ -2.12
KRT9P35527 Y_RNA.570-201ENST00000384750 101 ntBASIC1.83□□□□□ -2.12
KRT9P35527 POLR2KP2-201ENST00000438155 177 ntBASIC1.83□□□□□ -2.12
KRT9P35527 HSPE1P24-201ENST00000450782 238 ntBASIC1.83□□□□□ -2.12
KRT9P35527 Y_RNA.679-201ENST00000516416 91 ntBASIC1.83□□□□□ -2.12
KRT9P35527 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.83□□□□□ -2.12
KRT9P35527 AL162424.1-201ENST00000602325 221 ntBASIC1.83□□□□□ -2.12
KRT9P35527 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
KRT9P35527 RNU6-454P-201ENST00000364292 107 ntBASIC1.82□□□□□ -2.12
KRT9P35527 RNU6-740P-201ENST00000364734 105 ntBASIC1.82□□□□□ -2.12
KRT9P35527 MIR548M-201ENST00000408260 86 ntBASIC1.82□□□□□ -2.12
KRT9P35527 Y_RNA.590-201ENST00000410140 107 ntBASIC1.82□□□□□ -2.12
KRT9P35527 RNA5SP475-201ENST00000410568 110 ntBASIC1.82□□□□□ -2.12
KRT9P35527 AL161935.2-201ENST00000414627 60 ntBASIC1.82□□□□□ -2.12
KRT9P35527 MTCO1P5-201ENST00000433573 344 ntBASIC1.82□□□□□ -2.12
KRT9P35527 AC005042.3-201ENST00000453230 174 ntBASIC1.82□□□□□ -2.12
KRT9P35527 Y_RNA.644-201ENST00000459006 113 ntBASIC1.82□□□□□ -2.12
KRT9P35527 Y_RNA.674-201ENST00000516362 113 ntBASIC1.82□□□□□ -2.12
KRT9P35527 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.82□□□□□ -2.12
KRT9P35527 AL512605.2-201ENST00000592972 256 ntBASIC1.82□□□□□ -2.12
KRT9P35527 AL929325.1-201ENST00000603096 117 ntBASIC1.82□□□□□ -2.12
KRT9P35527 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
KRT9P35527 U6.115-201ENST00000636045 103 ntBASIC1.82□□□□□ -2.12
KRT9P35527 ICE2P2-201ENST00000483823 2787 ntBASIC1.81□□□□□ -2.12
KRT9P35527 Y_RNA.76-201ENST00000362931 109 ntBASIC1.81□□□□□ -2.12
KRT9P35527 RNU1-17P-201ENST00000363022 152 ntBASIC1.81□□□□□ -2.12
KRT9P35527 Y_RNA.150-201ENST00000363562 102 ntBASIC1.81□□□□□ -2.12
KRT9P35527 Y_RNA.383-201ENST00000383855 97 ntBASIC1.81□□□□□ -2.12
KRT9P35527 RNU6-950P-201ENST00000384651 107 ntBASIC1.81□□□□□ -2.12
KRT9P35527 RNU2-61P-201ENST00000411069 191 ntBASIC1.81□□□□□ -2.12
KRT9P35527 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.81□□□□□ -2.12
KRT9P35527 AC010154.1-201ENST00000425857 269 ntBASIC1.81□□□□□ -2.12
KRT9P35527 AC245047.3-201ENST00000429428 127 ntBASIC1.81□□□□□ -2.12
KRT9P35527 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.81□□□□□ -2.12
KRT9P35527 AC097462.1-201ENST00000514125 324 ntBASIC1.81□□□□□ -2.12
KRT9P35527 SNORA31.10-201ENST00000516482 106 ntBASIC1.81□□□□□ -2.12
KRT9P35527 SNORA27.4-201ENST00000516650 95 ntBASIC1.81□□□□□ -2.12
KRT9P35527 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
KRT9P35527 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.81□□□□□ -2.12
KRT9P35527 AC024405.2-202ENST00000532731 184 ntBASIC1.81□□□□□ -2.12
KRT9P35527 AC073413.2-201ENST00000604332 360 ntBASIC1.81□□□□□ -2.12
KRT9P35527 AC022441.3-201ENST00000605737 136 ntBASIC1.81□□□□□ -2.12
KRT9P35527 FTX_2.1-201ENST00000618816 94 ntBASIC1.81□□□□□ -2.12
KRT9P35527 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.81□□□□□ -2.12
KRT9P35527 MIR8063-201ENST00000621930 81 ntBASIC1.81□□□□□ -2.12
KRT9P35527 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRT9P35527 SNORA27.1-201ENST00000362604 124 ntBASIC1.8□□□□□ -2.12
KRT9P35527 Y_RNA.122-201ENST00000363331 96 ntBASIC1.8□□□□□ -2.12
KRT9P35527 RNU1-22P-201ENST00000363334 158 ntBASIC1.8□□□□□ -2.12
KRT9P35527 Y_RNA.180-201ENST00000363867 113 ntBASIC1.8□□□□□ -2.12
KRT9P35527 Y_RNA.275-201ENST00000364726 110 ntBASIC1.8□□□□□ -2.12
KRT9P35527 Y_RNA.292-201ENST00000364904 97 ntBASIC1.8□□□□□ -2.12
KRT9P35527 RNU6-407P-201ENST00000365280 104 ntBASIC1.8□□□□□ -2.12
KRT9P35527 MIR194-1-201ENST00000384892 85 ntBASIC1.8□□□□□ -2.12
KRT9P35527 RNU4-61P-201ENST00000411243 107 ntBASIC1.8□□□□□ -2.12
KRT9P35527 Y_RNA.626-201ENST00000411288 95 ntBASIC1.8□□□□□ -2.12
KRT9P35527 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
KRT9P35527 AC104332.1-201ENST00000440471 797 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms